RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 NUDT17P0C025 328 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 ATP1B2P14415 290 aaPredicted RBP25.07■■□□□ 1.6
SSBP3-202ENST00000357475 THOP1P52888 689 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 PGGT1BP53609 377 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 FZD2Q14332 565 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 ZNF542PQ5EBM4 170 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 ZC3HC1Q86WB0 502 aaKnown RBP25.07■■□□□ 1.6
SSBP3-202ENST00000357475 LKAAEAR1Q8TD35 194 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 EPS8L3Q8TE67 593 aaKnown RBP25.07■■□□□ 1.6
SSBP3-202ENST00000357475 DCAKDQ8WVC6 231 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 SLC44A1Q8WWI5 657 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 TSACCQ96A04 125 aaPredicted RBP25.07■■□□□ 1.6
SSBP3-202ENST00000357475 DCUN1D1Q96GG9 259 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 WDR92Q96MX6 357 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 CPNE1Q99829 537 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 ARGLU1Q9NWB6 273 aaPredicted RBP25.07■■□□□ 1.6
SSBP3-202ENST00000357475 SLC17A4Q9Y2C5 497 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 NFS1Q9Y697 457 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 A0A1B0GVT2 93 aa25.06■■□□□ 1.6
SSBP3-202ENST00000357475 PATE3B3GLJ2 98 aa25.06■■□□□ 1.6
SSBP3-202ENST00000357475 DNAJC6O75061 913 aa25.06■■□□□ 1.6
SSBP3-202ENST00000357475 CDK14O94921 469 aa25.06■■□□□ 1.6
SSBP3-202ENST00000357475 AFF3P51826 1226 aaKnown RBP25.06■■□□□ 1.6
SSBP3-202ENST00000357475 BNC1Q01954 994 aa25.06■■□□□ 1.6
SSBP3-202ENST00000357475 CCDC6Q16204 474 aa25.06■■□□□ 1.6
SSBP3-202ENST00000357475 RNF187Q5TA31 235 aaPredicted RBP25.06■■□□□ 1.6
SSBP3-202ENST00000357475 PEAR1Q5VY43 1037 aaPredicted RBP25.06■■□□□ 1.6
SSBP3-202ENST00000357475 ZC3H14Q6PJT7 736 aaKnown RBP25.06■■□□□ 1.6
SSBP3-202ENST00000357475 CRTC3Q6UUV7 619 aa25.06■■□□□ 1.6
SSBP3-202ENST00000357475 SYT12Q8IV01 421 aa25.06■■□□□ 1.6
SSBP3-202ENST00000357475 ZNF547Q8IVP9 402 aa25.06■■□□□ 1.6
SSBP3-202ENST00000357475 OR56A4Q8NGH8 313 aa25.06■■□□□ 1.6
SSBP3-202ENST00000357475 DHRS4Q9BTZ2 278 aa25.06■■□□□ 1.6
SSBP3-202ENST00000357475 CTNNAL1Q9UBT7 734 aa25.06■■□□□ 1.6
SSBP3-202ENST00000357475 KLF15Q9UIH9 416 aa25.06■■□□□ 1.6
SSBP3-202ENST00000357475 TDRD6O60522 2096 aaKnown RBP25.05■■□□□ 1.6
SSBP3-202ENST00000357475 SPTY2D1-AS1A0A0U1RR47 76 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 A0A1B0GTW7 788 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 SMIM23A6NLE4 172 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 PRMT5O14744 637 aaPredicted RBP25.05■■□□□ 1.6
SSBP3-202ENST00000357475 VILLO15195 856 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 ZNF7P17097 686 aaPredicted RBP25.05■■□□□ 1.6
SSBP3-202ENST00000357475 GP5P40197 560 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 NSG1P42857 185 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 SLCO1A2P46721 670 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 CD151P48509 253 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 EIF2B5Q13144 721 aaKnown RBP25.05■■□□□ 1.6
SSBP3-202ENST00000357475 NAB1Q13506 487 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 ALG11Q2TAA5 492 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 MACC1Q6ZN28 852 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 GALNT7Q86SF2 657 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 IQCHQ86VS3 1027 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 IQCKQ8N0W5 287 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 KRT222Q8N1A0 295 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 FAM136AQ96C01 138 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 ZIM3Q96PE6 472 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 TTC1Q99614 292 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 RBBP8Q99708 897 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 PRRX2Q99811 253 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 SMOC1Q9H4F8 434 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 TM7SF3Q9NS93 570 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 MOSPD1Q9UJG1 213 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 SUFUQ9UMX1 484 aa25.05■■□□□ 1.6
SSBP3-202ENST00000357475 SMG5Q9UPR3 1016 aaKnown RBP25.05■■□□□ 1.6
SSBP3-202ENST00000357475 HMX2A2RU54 273 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 TOR1BO14657 336 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 VEGFDO43915 354 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 NUAK1O60285 661 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 ITGB6P18564 788 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 NXPH1P58417 271 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 CASP8Q14790 479 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 PRAMEF14Q5SWL7 426 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 TMEM220Q6QAJ8 160 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 GABPB2Q8TAK5 448 aaPredicted RBP25.04■■□□□ 1.6
SSBP3-202ENST00000357475 SCG3Q8WXD2 468 aaKnown RBP25.04■■□□□ 1.6
SSBP3-202ENST00000357475 ANKRD7Q92527 254 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 VPS39Q96JC1 886 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 CLPBQ9H078 707 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 TCEAL2Q9H3H9 227 aaPredicted RBP25.04■■□□□ 1.6
SSBP3-202ENST00000357475 CYP4F12Q9HCS2 524 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 NSMCE4AQ9NXX6 385 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 GALPQ9UBC7 116 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 MTO1Q9Y2Z2 717 aaKnown RBP25.04■■□□□ 1.6
SSBP3-202ENST00000357475 MUC6Q6W4X9 2439 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 GPR179Q6PRD1 2367 aa25.04■■□□□ 1.6
SSBP3-202ENST00000357475 CACNA1EQ15878 2313 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 PRSS38A1L453 326 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 CHUKO15111 745 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 NIPSNAP2O75323 286 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 GNSP15586 552 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 HTR1BP28222 390 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 PPARGP37231 505 aaPredicted RBP25.03■■□□□ 1.6
SSBP3-202ENST00000357475 MSH2P43246 934 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 BMPR2Q13873 1038 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 TCEA2Q15560 299 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 PLA2G4EQ3MJ16 856 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 RD3Q7Z3Z2 195 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 FAM174AQ8TBP5 190 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 ARRDC1-AS1Q9H2J1 176 aa25.03■■□□□ 1.6
SSBP3-202ENST00000357475 RHOJQ9H4E5 214 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms