RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 ARPC4-TTLL3A0A0A6YYG9 625 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 LGALS2P05162 132 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 USP17L7P0C7H9 530 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 AZGP1P25311 298 aaKnown RBP12.75□□□□□ -0.37
SMC4-202ENST00000357388 SLC9A3P48764 834 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 SEC23AQ15436 765 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 FAM71AQ8IYT1 594 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 GPR135Q8IZ08 494 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 OR8D1Q8WZ84 308 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 ALG2Q9H553 416 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 DDTLA6NHG4 134 aaPredicted RBP12.75□□□□□ -0.37
SMC4-202ENST00000357388 TBX1O43435 398 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 RECQL4O94761 1208 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 GJB6O95452 261 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 CD86P42081 329 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 KIR3DL1P43629 444 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 FKBP1AP62942 108 aaKnown RBP12.75□□□□□ -0.37
SMC4-202ENST00000357388 MRPS6P82932 125 aaKnown RBP12.75□□□□□ -0.37
SMC4-202ENST00000357388 NOMO2Q5JPE7 1267 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 ZYG11AQ6WRX3 759 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 SCUBE3Q8IX30 993 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 PIGXQ8TBF5 258 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 CLP1Q92989 425 aaKnown RBP12.75□□□□□ -0.37
SMC4-202ENST00000357388 POLR3BQ9NW08 1133 aaPredicted RBP12.75□□□□□ -0.37
SMC4-202ENST00000357388 CALML5Q9NZT1 146 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 SLC17A7Q9P2U7 560 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 IKZF2Q9UKS7 526 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 OR6C70A6NIJ9 312 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 CSDE1O75534 798 aaKnown RBP12.75□□□□□ -0.37
SMC4-202ENST00000357388 IPO13O94829 963 aaKnown RBP12.75□□□□□ -0.37
SMC4-202ENST00000357388 HNRNPLP14866 589 aaKnown RBP eCLIP12.75□□□□□ -0.372e-15■■■■■ 47.4
SMC4-202ENST00000357388 LARS2Q15031 903 aaKnown RBP12.75□□□□□ -0.37
SMC4-202ENST00000357388 TEAD4Q15561 434 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 NTRK3Q16288 839 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 VMACQ2NL98 169 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 GRHL2Q6ISB3 625 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 USP30Q70CQ3 517 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 TDRPQ86YL5 185 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 RBFAQ8N0V3 343 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 TMEM9Q9P0T7 183 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 SEC14L3Q9UDX4 400 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 CDH7Q9ULB5 785 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 RPL36Q9Y3U8 105 aaKnown RBP12.75□□□□□ -0.37
SMC4-202ENST00000357388 SALL1Q9NSC2 1324 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 TRBC1P01850 177 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 PEX2P28328 305 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 PNLIPRP1P54315 467 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 PFKPQ01813 784 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 SULT2A1Q06520 285 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 C4orf46Q504U0 113 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 CHSY3Q70JA7 882 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 DNAAF5Q86Y56 855 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 MCEMP1Q8IX19 187 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 DPAGT1Q9H3H5 408 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 MTRRQ9UBK8 725 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 DNAJB9Q9UBS3 223 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 OR12D3Q9UGF7 316 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 PCDHGC3Q9UN70 934 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 CROCC2H7BZ55 1655 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 XKRYO14609 159 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 GRK5P34947 590 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 HSPA14Q0VDF9 509 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 NOGQ13253 232 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 DEFB115Q30KQ5 88 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 PRAMEF17Q5VTA0 474 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 PIGKQ92643 395 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 CREB3L1Q96BA8 519 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 CLIP3Q96DZ5 547 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 COPS4Q9BT78 406 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 LRTM1Q9HBL6 345 aa12.75□□□□□ -0.37
SMC4-202ENST00000357388 ISM1B1AKI9 464 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 SLC2A2P11168 524 aaPredicted RBP12.74□□□□□ -0.37
SMC4-202ENST00000357388 LPOP22079 712 aaPredicted RBP12.74□□□□□ -0.37
SMC4-202ENST00000357388 RFX5P48382 616 aaPredicted RBP12.74□□□□□ -0.37
SMC4-202ENST00000357388 GARNL3Q5VVW2 1013 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 HMBOX1Q6NT76 420 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 CMTR2Q8IYT2 770 aaKnown RBP12.74□□□□□ -0.37
SMC4-202ENST00000357388 HDDC3Q8N4P3 179 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 FITM2Q8N6M3 262 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 LNX1Q8TBB1 728 aaPredicted RBP12.74□□□□□ -0.37
SMC4-202ENST00000357388 KCNS3Q9BQ31 491 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMC4-202ENST00000357388 FKBP7Q9Y680 259 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 TRPM1Q7Z4N2 1603 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 ADGRB3O60242 1522 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 A0A1W2PPM1 405 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 H0YJX3 145 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 IL1BP01584 269 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 PRKD1Q15139 912 aaPredicted RBP12.74□□□□□ -0.37
SMC4-202ENST00000357388 FAM189A2Q15884 450 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 ZNF311Q5JNZ3 666 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 C11orf65Q8NCR3 313 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 OR4L1Q8NH43 312 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 RHBDF1Q96CC6 855 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 KCTD15Q96SI1 283 aaPredicted RBP12.74□□□□□ -0.37
SMC4-202ENST00000357388 SNRNP25Q9BV90 132 aaKnown RBP12.74□□□□□ -0.37
SMC4-202ENST00000357388 ZYG11BQ9C0D3 744 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 TREM1Q9NP99 234 aa12.74□□□□□ -0.37
SMC4-202ENST00000357388 FBXO9Q9UK97 447 aaPredicted RBP12.74□□□□□ -0.37
SMC4-202ENST00000357388 PCDHB1Q9Y5F3 818 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms