RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 GRSF1Q12849 480 aaKnown RBP eCLIP8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 ACAP2Q15057 778 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 PLA2G4EQ3MJ16 856 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 SLC36A3Q495N2 470 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 ZNF678Q5SXM1 525 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 TAPT1Q6NXT6 567 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 TMEM207Q6UWW9 146 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 UTS2BQ765I0 119 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 RAB44Q7Z6P3 723 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 ZNF598Q86UK7 904 aaKnown RBP8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 STK32CQ86UX6 486 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 SNX29P2Q8IUI4 249 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 CCDC28AQ8IWP9 274 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 TRIB2Q92519 343 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 SGCDQ92629 289 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 PEX13Q92968 403 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 ZUFSPQ96AP4 578 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 PTERQ96BW5 349 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 TSPAN17Q96FV3 270 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 FCRL2Q96LA5 508 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 MRGPRX2Q96LB1 330 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 MUS81Q96NY9 551 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 LTB4R2Q9NPC1 389 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 IFT80Q9P2H3 777 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 DNMT3BQ9UBC3 853 aaKnown RBP8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 CPA4Q9UI42 421 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 RAD54BQ9Y620 910 aa8.18□□□□□ -1.1
CDC42SE1-201ENST00000357235 DNAJC25-GNG10A0A024R161 153 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 ZBBXA8MT70 800 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 PTGES3LE9PB15 166 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 TOR1BO14657 336 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 AZIN1O14977 448 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 DYRK3O43781 588 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 TSPAN3O60637 253 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 MAFKO60675 156 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 DEAF1O75398 565 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 CDK14O94921 469 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 DARSP14868 501 aaKnown RBP8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 GLULP15104 373 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 CTRB1P17538 263 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 MATN1P21941 496 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 CAPGP40121 348 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 GSK3BP49841 420 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 KCNK10P57789 538 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 UNC50Q53HI1 259 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 RSBN1Q5VWQ0 802 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 CTRB2Q6GPI1 263 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 NEK5Q6P3R8 708 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 ISCA2Q86U28 154 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 SLC22A16Q86VW1 577 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 CNTN4Q8IWV2 1026 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 GIMAP1Q8WWP7 306 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 LPPQ93052 612 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 TRIM63Q969Q1 353 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 ROPN1LQ96C74 230 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 TBATAQ96M53 351 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 FCRL5Q96RD9 977 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 AIFM2Q9BRQ8 373 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 BEGAINQ9BUH8 593 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 ADAMTS10Q9H324 1103 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 MAGEE1Q9HCI5 957 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 SCUBE2Q9NQ36 999 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 FAM155AB1AL88 458 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 GJB3O75712 270 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 POLR2CP19387 275 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 CCNCP24863 283 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 PSMD8P48556 350 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 SERPINH1P50454 418 aaKnown RBP8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 CLCNKBP51801 687 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 DSC2Q02487 901 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 SCAPQ12770 1279 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 DOCK1Q14185 1865 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 MAPK11Q15759 364 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 NPTX1Q15818 432 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 UGT3A2Q3SY77 523 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 PRAMEF19Q5SWL8 479 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 NOL9Q5SY16 702 aaKnown RBP8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 KIAA0930Q6ICG6 404 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 TBPL2Q6SJ96 375 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 ALKAL1Q6UXT8 129 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 ADGRG5Q8IZF4 528 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 ZCCHC7Q8N3Z6 543 aaKnown RBP8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 TTC30BQ8N4P2 665 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 TRPV3Q8NET8 790 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 NUDT8Q8WV74 236 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 KCTD13Q8WZ19 329 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 TEX37Q96LM6 180 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 PPM1MQ96MI6 270 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 GAD1Q99259 594 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 ACOX2Q99424 681 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 HOPXQ9BPY8 73 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 PAAF1Q9BRP4 392 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 CHID1Q9BWS9 393 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 CLPBQ9H078 707 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 ANAPC2Q9UJX6 822 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 COMMD10Q9Y6G5 202 aa8.17□□□□□ -1.1
CDC42SE1-201ENST00000357235 GPR32O75388 356 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms