RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 DEFB124Q8NES8 71 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 OR52K1Q8NGK4 314 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 OR4C6Q8NH72 309 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 DNAJC1Q96KC8 554 aaKnown RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 C16orf45Q96MC5 204 aaPredicted RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 AGAP2Q99490 1192 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 SLC30A3Q99726 388 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 TUBB2BQ9BVA1 445 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 DUSP23Q9BVJ7 150 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 GSDMCQ9BYG8 508 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 DDX47Q9H0S4 455 aaKnown RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 XAB2Q9HCS7 855 aaKnown RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 NLE1Q9NVX2 485 aaPredicted RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 NCKIPSDQ9NZQ3 722 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 APPL1Q9UKG1 709 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 CNOT6Q9ULM6 557 aaKnown RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 TCAF1Q9Y4C2 921 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 ARL5AQ9Y689 179 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 OAS3Q9Y6K5 1087 aaKnown RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 ZFC3H1O60293 1989 aaKnown RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 ELOA3CA0A087WX78 387 aaPredicted RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 NEMP2A6NFY4 417 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 TMEM202A6NGA9 273 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 MROH6A6NGR9 719 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 ELOA3DA6NLF2 546 aaPredicted RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 LMO7DNF2Z398 122 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 DNALI1O14645 258 aaPredicted RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 SCAMP1O15126 338 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 INPP4BO15327 924 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 VEGFDO43915 354 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 SH3BP5O60239 455 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 SDC3O75056 442 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 TMEM63AO94886 807 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 KCNK5O95279 499 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 PRAMEF1O95521 474 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 LDOC1O95751 146 aaPredicted RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 CEACAM5P06731 702 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 ANXA6P08133 673 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 MLNP12872 115 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 CTSEP14091 401 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 ADRA1DP25100 572 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 NPY2RP49146 381 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 VPS41P49754 854 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 DR1Q01658 176 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 ACVR1Q04771 509 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 BNIP3Q12983 259 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 LRP8Q14114 963 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 POU6F1Q14863 301 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 CHRNA6Q15825 494 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 WHAMMP3Q1A5X7 153 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 ELOA3BQ3SY89 546 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 TSTD2Q5T7W7 516 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 RNASEH2BQ5TBB1 312 aaKnown RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 ZCCHC8Q6NZY4 707 aaKnown RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 DOK6Q6PKX4 331 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 AFTPHQ6ULP2 937 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 FAM151BQ6UXP7 276 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 ZNF534Q76KX8 674 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 PCGF5Q86SE9 256 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 TRIM74Q86UV6 250 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 HOOK3Q86VS8 718 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 GATAD2AQ86YP4 633 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 JAMLQ86YT9 394 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 GALNT13Q8IUC8 556 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 PPIL6Q8IXY8 311 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 FAM181AQ8N9Y4 354 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 ELOA3Q8NG57 546 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 OR4K2Q8NGD2 314 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 LMX1AQ8TE12 382 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 SETD7Q8WTS6 366 aaKnown RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 HEXDCQ8WVB3 486 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 CPT1BQ92523 772 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 CNDP2Q96KP4 475 aaKnown RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 SPOCK3Q9BQ16 436 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 LGR4Q9BXB1 951 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 IL22Q9GZX6 179 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 TCEAL2Q9H3H9 227 aaPredicted RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 CARS2Q9HA77 564 aaKnown RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 BPIFA1Q9NP55 256 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 IL26Q9NPH9 171 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 BRD7Q9NPI1 651 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 TRNAU1APQ9NX07 287 aaKnown RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 ASIC3Q9UHC3 531 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 CRLS1Q9UJA2 301 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 PNMA8BQ9ULN7 279 aaPredicted RBP3.93□□□□□ -1.78
CNOT4-202ENST00000356162 SUFUQ9UMX1 484 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 BTBD3Q9Y2F9 522 aa3.93□□□□□ -1.78
CNOT4-202ENST00000356162 TRBV5-4A0A0C4DH59 114 aa3.92□□□□□ -1.78
CNOT4-202ENST00000356162 ADARB2-AS1A8MUL3 147 aa3.92□□□□□ -1.78
CNOT4-202ENST00000356162 MSTNO14793 375 aa3.92□□□□□ -1.78
CNOT4-202ENST00000356162 FFAR2O15552 330 aa3.92□□□□□ -1.78
CNOT4-202ENST00000356162 TNFSF14O43557 240 aa3.92□□□□□ -1.78
CNOT4-202ENST00000356162 DNAJC6O75061 913 aa3.92□□□□□ -1.78
CNOT4-202ENST00000356162 SRP72O76094 671 aaKnown RBP3.92□□□□□ -1.78
CNOT4-202ENST00000356162 ASMTLO95671 621 aa3.92□□□□□ -1.78
CNOT4-202ENST00000356162 PROCP04070 461 aa3.92□□□□□ -1.78
CNOT4-202ENST00000356162 MC4RP32245 332 aa3.92□□□□□ -1.78
CNOT4-202ENST00000356162 FOXN2P32314 431 aa3.92□□□□□ -1.78
CNOT4-202ENST00000356162 MAGEA3P43357 314 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms