RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 H3BM21 787 aa17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 FFAR2O15552 330 aa17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 NUAK1O60285 661 aa17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 OR1I1O60431 355 aa17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 DFNA5O60443 496 aa17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 FOXD2O60548 495 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 IVLP07476 585 aa17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 CTSEP14091 401 aa17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 PAMP19021 973 aa17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 ECHS1P30084 290 aa17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 UNC5AQ6ZN44 842 aa17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 GALNT13Q8IUC8 556 aa17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 ZNF547Q8IVP9 402 aa17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 CLDN19Q8N6F1 224 aa17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 SCARF2Q96GP6 870 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 C20orf96Q9NUD7 363 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 FAM169AQ9Y6X4 670 aa17.66■□□□□ 0.42
PDLIM7-202ENST00000355841 GRID2O43424 1007 aa17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 VEGFDO43915 354 aa17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 SLU7O95391 586 aaKnown RBP17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 AK4P27144 223 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 BLKP51451 505 aa17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 LONRF1Q17RB8 773 aa17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 ARMC3Q5W041 872 aa17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 CHST15Q7LFX5 561 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 KANSL1Q7Z3B3 1105 aa17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 TRAPPC5Q8IUR0 188 aa17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 BEND7Q8N7W2 519 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 LRRC39Q96DD0 335 aa17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 DCUN1D1Q96GG9 259 aa17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 OR2M4Q96R27 311 aa17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 ZDHHC3Q9NYG2 299 aa17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 SPASTQ9UBP0 616 aa17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 BTBD3Q9Y2F9 522 aa17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 V9GYY5 206 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-202ENST00000355841 CHUKO15111 745 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 AQP9O43315 295 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 ERVK-10P10266 1014 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 ACP5P13686 325 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 CD59P13987 128 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 GTF2H3Q13889 308 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 DEFB133Q30KQ1 61 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 HSP90AA5PQ58FG0 334 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 NEPROQ6NW34 567 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 TRMT10BQ6PF06 316 aaKnown RBP17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 TMEM220Q6QAJ8 160 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 IFT20Q8IY31 132 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 PYROXD1Q8WU10 500 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 SGSM3Q96HU1 749 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 C9orf72Q96LT7 481 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 CAMK1GQ96NX5 476 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 NAT9Q9BTE0 207 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 SLC23A2Q9UGH3 650 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 NFU1Q9UMS0 254 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 PRSS21Q9Y6M0 314 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 SPEGQ15772 3267 aa17.64■□□□□ 0.42
PDLIM7-202ENST00000355841 PIEZO1Q92508 2521 aa17.64■□□□□ 0.41
PDLIM7-202ENST00000355841 LRP4O75096 1905 aa17.64■□□□□ 0.41
PDLIM7-202ENST00000355841 PCDHGA12O60330 932 aa17.64■□□□□ 0.41
PDLIM7-202ENST00000355841 TTC4O95801 387 aa17.64■□□□□ 0.41
PDLIM7-202ENST00000355841 CTBSQ01459 385 aa17.64■□□□□ 0.41
PDLIM7-202ENST00000355841 SPANXN3Q5MJ09 141 aa17.64■□□□□ 0.41
PDLIM7-202ENST00000355841 ZNF470Q6ECI4 717 aa17.64■□□□□ 0.41
PDLIM7-202ENST00000355841 SLC30A9Q6PML9 568 aa17.64■□□□□ 0.41
PDLIM7-202ENST00000355841 DENND6AQ8IWF6 608 aa17.64■□□□□ 0.41
PDLIM7-202ENST00000355841 ZCCHC2Q9C0B9 1178 aaKnown RBP17.64■□□□□ 0.41
PDLIM7-202ENST00000355841 PPANQ9NQ55 473 aaKnown RBP17.64■□□□□ 0.41
PDLIM7-202ENST00000355841 SLC17A6Q9P2U8 582 aa17.64■□□□□ 0.41
PDLIM7-202ENST00000355841 KCNK6Q9Y257 313 aa17.64■□□□□ 0.41
PDLIM7-202ENST00000355841 IGLV3-16A0A075B6K0 115 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 YY2O15391 372 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 YKT6O15498 198 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 SGTAO43765 313 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 SH3BP5O60239 455 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 PIAS1O75925 651 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 ZNF883P0CG24 379 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 ATP1B2P14415 290 aaPredicted RBP17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 PMLP29590 882 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 PBLDP30039 288 aaPredicted RBP17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 SSTR1P30872 391 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 CTBP1Q13363 440 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 THOC5Q13769 683 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 STEAP4Q687X5 459 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 TAF8Q7Z7C8 310 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 LRRTM4Q86VH4 590 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 KCNMB4Q86W47 210 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 NRROSQ86YC3 692 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 CCNJLQ8IV13 435 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 SFTPA2Q8IWL1 248 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 GSPT2Q8IYD1 628 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 EID2Q8N6I1 236 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 SETD7Q8WTS6 366 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 RMI1Q9H9A7 625 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 IARS2Q9NSE4 1012 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 DNAJC16Q9Y2G8 782 aa17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 ASCC3Q8N3C0 2202 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-202ENST00000355841 TRIM38O00635 465 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms