RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 PLEKHG4BQ96PX9 1271 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 PRPF18Q99633 342 aaKnown RBP21.56■■□□□ 1.04
SHMT1-202ENST00000352886 FEM1AQ9BSK4 669 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 SLC2A11Q9BYW1 496 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 TSR3Q9UJK0 312 aaKnown RBP21.56■■□□□ 1.04
SHMT1-202ENST00000352886 H0YJX3 145 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 AKAP10O43572 662 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 OR4F21O95013 312 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 HSD17B1P14061 328 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 CTPS1P17812 591 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 APLP1P51693 650 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 CLCN7P51798 805 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 KCNK10P57789 538 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 INO80DQ53TQ3 878 aaPredicted RBP21.56■■□□□ 1.04
SHMT1-202ENST00000352886 COQ5Q5HYK3 327 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 ZNF783Q6ZMS7 281 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 SPPL2CQ8IUH8 684 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 CDK15Q96Q40 435 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 SLC29A1Q99808 456 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 GPR63Q9BZJ6 419 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 ZNF696Q9H7X3 374 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 COMMD10Q9Y6G5 202 aa21.56■■□□□ 1.04
SHMT1-202ENST00000352886 A0A1W2PP18 115 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 FZD6O60353 706 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 BAIAP3O94812 1187 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 OR6B1O95007 311 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 TFAP2AP05549 437 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 ALPIP09923 528 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 PSMC3P17980 439 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 SMAD3P84022 425 aaKnown RBP21.55■■□□□ 1.04
SHMT1-202ENST00000352886 RCAN2Q14206 197 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 LYSMD3Q7Z3D4 306 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 CDYL2Q8N8U2 506 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 OR52B6Q8NGF0 335 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 BHMTQ93088 406 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 C1orf50Q9BV19 199 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 P2RY12Q9H244 342 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 ARMC1Q9NVT9 282 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 AURKCQ9UQB9 309 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 SLC30A1Q9Y6M5 507 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 PLXNA4Q9HCM2 1894 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 MICAL3Q7RTP6 2002 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 SMIM31A0A1B0GVY4 71 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 CACNG1Q06432 222 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 AP1ARQ63HQ0 302 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.55■■□□□ 1.04
SHMT1-202ENST00000352886 DEFB128Q7Z7B8 93 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 STK40Q8N2I9 435 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 ZFAND2BQ8WV99 257 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 TRMT2BQ96GJ1 504 aaKnown RBP21.55■■□□□ 1.04
SHMT1-202ENST00000352886 VPS51Q9UID3 782 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 STOML2Q9UJZ1 356 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 TMCO1Q9UM00 188 aa21.55■■□□□ 1.04
SHMT1-202ENST00000352886 ASPDHA6ND91 283 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 ETS2P15036 469 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 ATP6V1B1P15313 513 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 HMGCLP35914 325 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 RPL5P46777 297 aaKnown RBP21.54■■□□□ 1.04
SHMT1-202ENST00000352886 ZFP36L2P47974 494 aaKnown RBP21.54■■□□□ 1.04
SHMT1-202ENST00000352886 UFM1P61960 85 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 FOXM1Q08050 763 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 BNIP2Q12982 314 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 NFYCQ13952 458 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 VEPH1Q14D04 833 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 IRAK1BP1Q5VVH5 260 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 CHERPQ8IWX8 916 aaKnown RBP21.54■■□□□ 1.04
SHMT1-202ENST00000352886 TTC16Q8NEE8 873 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 OR6K2Q8NGY2 324 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 DNAJB14Q8TBM8 379 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 TSPEARQ8WU66 669 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 NAT14Q8WUY8 206 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 ZFRQ96KR1 1074 aaKnown RBP21.54■■□□□ 1.04
SHMT1-202ENST00000352886 SLC22A12Q96S37 553 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 TM6SF2Q9BZW4 377 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 TRIM15Q9C019 465 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 CREBZFQ9NS37 354 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 CCM2LQ9NUG4 571 aaPredicted RBP21.54■■□□□ 1.04
SHMT1-202ENST00000352886 PCDHA9Q9Y5H5 950 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 ANKRD33BA6NCL7 494 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 AQP12BA6NM10 295 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 SLC22A3O75751 556 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 CKMT2P17540 419 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 ARL1P40616 181 aaPredicted RBP21.54■■□□□ 1.04
SHMT1-202ENST00000352886 CSKP41240 450 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 GRIK2Q13002 908 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 CWF19L1Q69YN2 538 aaKnown RBP21.54■■□□□ 1.04
SHMT1-202ENST00000352886 FRA10AC1Q70Z53 315 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 ERMP1Q7Z2K6 904 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 AQP12AQ8IXF9 295 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 WFDC5Q8TCV5 224 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 CCDC97Q96F63 343 aaPredicted RBP21.54■■□□□ 1.04
SHMT1-202ENST00000352886 OSBPL11Q9BXB4 747 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 MRPS26Q9BYN8 205 aaKnown RBP21.54■■□□□ 1.04
SHMT1-202ENST00000352886 PFDN4Q9NQP4 134 aa21.54■■□□□ 1.04
SHMT1-202ENST00000352886 DHRS12A0PJE2 317 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 K7ERQ8 282 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 PRMT5O14744 637 aaPredicted RBP21.53■■□□□ 1.04
SHMT1-202ENST00000352886 ERVK-8P63133 956 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 PAGE3Q5JUK9 113 aa21.53■■□□□ 1.04
SHMT1-202ENST00000352886 TBCELQ5QJ74 424 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms