RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 RBM44Q6ZP01 1051 aaKnown RBP23.45■■□□□ 1.34
USP25-203ENST00000351097 RETREG3Q86VR2 466 aa23.45■■□□□ 1.34
USP25-203ENST00000351097 DCAF4L2Q8NA75 395 aa23.45■■□□□ 1.34
USP25-203ENST00000351097 SMIM14Q96QK8 99 aa23.45■■□□□ 1.34
USP25-203ENST00000351097 ATOH8Q96SQ7 321 aa23.45■■□□□ 1.34
USP25-203ENST00000351097 SLC39A3Q9BRY0 314 aa23.45■■□□□ 1.34
USP25-203ENST00000351097 OSBPL11Q9BXB4 747 aa23.45■■□□□ 1.34
USP25-203ENST00000351097 HCFC1R1Q9NWW0 138 aa23.45■■□□□ 1.34
USP25-203ENST00000351097 CNOT6Q9ULM6 557 aaKnown RBP23.45■■□□□ 1.34
USP25-203ENST00000351097 FCF1Q9Y324 198 aaKnown RBP23.45■■□□□ 1.34
USP25-203ENST00000351097 AK5Q9Y6K8 562 aa23.45■■□□□ 1.34
USP25-203ENST00000351097 NR5A2O00482 541 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 PIP5K1BO14986 540 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 ATP6V1B1P15313 513 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 ZNF140P52738 457 aaPredicted RBP23.44■■□□□ 1.34
USP25-203ENST00000351097 STC1P52823 247 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 TYSND1Q2T9J0 566 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 MTX3Q5HYI7 312 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 NCEH1Q6PIU2 408 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 MIER2Q8N344 545 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 CPXM2Q8N436 756 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 LPCAT1Q8NF37 534 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 MDGA1Q8NFP4 955 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 HOPXQ9BPY8 73 aaPredicted RBP23.44■■□□□ 1.34
USP25-203ENST00000351097 GPATCH1Q9BRR8 931 aaKnown RBP23.44■■□□□ 1.34
USP25-203ENST00000351097 SMG9Q9H0W8 520 aaKnown RBP23.44■■□□□ 1.34
USP25-203ENST00000351097 ZNF510Q9Y2H8 683 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 NDUFAF1Q9Y375 327 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 DENND4CQ5VZ89 1909 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 H3BMM5 538 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 PPP6CO00743 305 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 VILLO15195 856 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 TLL1O43897 1013 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 GFAPP14136 432 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 TRAF2Q12933 501 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 PRMT9Q6P2P2 845 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 APCDD1Q8J025 514 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 OR2T34Q8NGX1 318 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 OR2T3Q8NH03 318 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 NMD3Q96D46 503 aaKnown RBP23.44■■□□□ 1.34
USP25-203ENST00000351097 GRIP2Q9C0E4 1043 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 CLEC4EQ9ULY5 219 aa23.44■■□□□ 1.34
USP25-203ENST00000351097 LRRC14BA6NHZ5 514 aa23.43■■□□□ 1.34
USP25-203ENST00000351097 LEFTY2O00292 366 aa23.43■■□□□ 1.34
USP25-203ENST00000351097 CHRM1P11229 460 aaPredicted RBP23.43■■□□□ 1.34
USP25-203ENST00000351097 EN2P19622 333 aaPredicted RBP23.43■■□□□ 1.34
USP25-203ENST00000351097 CLCN4P51793 760 aa23.43■■□□□ 1.34
USP25-203ENST00000351097 FOXA1P55317 472 aa23.43■■□□□ 1.34
USP25-203ENST00000351097 TXNL4AP83876 142 aaKnown RBP23.43■■□□□ 1.34
USP25-203ENST00000351097 PSRC1Q6PGN9 363 aaPredicted RBP23.43■■□□□ 1.34
USP25-203ENST00000351097 GLT6D1Q7Z4J2 308 aa23.43■■□□□ 1.34
USP25-203ENST00000351097 PHYKPLQ8IUZ5 450 aa23.43■■□□□ 1.34
USP25-203ENST00000351097 CDKN2AIPNLQ96HQ2 116 aa23.43■■□□□ 1.34
USP25-203ENST00000351097 INTS10Q9NVR2 710 aaKnown RBP23.43■■□□□ 1.34
USP25-203ENST00000351097 NLE1Q9NVX2 485 aaPredicted RBP23.43■■□□□ 1.34
USP25-203ENST00000351097 PTTG2Q9NZH5 202 aa23.43■■□□□ 1.34
USP25-203ENST00000351097 PTGDR2Q9Y5Y4 395 aa23.43■■□□□ 1.34
USP25-203ENST00000351097 RHOAP61586 193 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 MAP7Q14244 749 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 TAF1AQ15573 450 aaPredicted RBP23.42■■□□□ 1.34
USP25-203ENST00000351097 TPGS1Q6ZTW0 290 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 DDIASQ8IXT1 998 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 POF1BQ8WVV4 589 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 NSUN5Q96P11 429 aaKnown RBP23.42■■□□□ 1.34
USP25-203ENST00000351097 SYTL2Q9HCH5 934 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 MAP10Q9P2G4 905 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 ABCD2Q9UBJ2 740 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 MYOCOSA0A1B0GUC4 107 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 ZNF839A8K0R7 811 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 ANKRD66B4E2M5 251 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 K7ERQ8 282 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 KERAO60938 352 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 NME5P56597 212 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 GRB7Q14451 532 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 ADRM1Q16186 407 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.42■■□□□ 1.34
USP25-203ENST00000351097 PITRM1Q5JRX3 1037 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 MPP7Q5T2T1 576 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 HMBOX1Q6NT76 420 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 AMIGO2Q86SJ2 522 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 SPPL3Q8TCT6 385 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 TRPC4APQ8TEL6 797 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 KIAA1191Q96A73 305 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 ZUFSPQ96AP4 578 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 RBM38Q9H0Z9 239 aaKnown RBP23.42■■□□□ 1.34
USP25-203ENST00000351097 ARMC1Q9NVT9 282 aa23.42■■□□□ 1.34
USP25-203ENST00000351097 ANGPT2O15123 496 aa23.41■■□□□ 1.34
USP25-203ENST00000351097 CLASP2O75122 1294 aaKnown RBP23.41■■□□□ 1.34
USP25-203ENST00000351097 MATN4O95460 622 aa23.41■■□□□ 1.34
USP25-203ENST00000351097 MPPE1Q53F39 396 aa23.41■■□□□ 1.34
USP25-203ENST00000351097 ATXN7L2Q5T6C5 722 aaPredicted RBP23.41■■□□□ 1.34
USP25-203ENST00000351097 OR4K2Q8NGD2 314 aa23.41■■□□□ 1.34
USP25-203ENST00000351097 STAG3L4Q8TBR4 150 aa23.41■■□□□ 1.34
USP25-203ENST00000351097 PPWD1Q96BP3 646 aaKnown RBP23.41■■□□□ 1.34
USP25-203ENST00000351097 C2orf49Q9BVC5 232 aaPredicted RBP23.41■■□□□ 1.34
USP25-203ENST00000351097 ADGRE3Q9BY15 652 aa23.41■■□□□ 1.34
USP25-203ENST00000351097 NOL11Q9H8H0 719 aaKnown RBP23.41■■□□□ 1.34
USP25-203ENST00000351097 GIMAP2Q9UG22 337 aa23.41■■□□□ 1.34
USP25-203ENST00000351097 NME4O00746 187 aa23.41■■□□□ 1.34
USP25-203ENST00000351097 RFPL2O75678 378 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms