RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 PIANPQ8IYJ0 282 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 EID2Q8N6I1 236 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 OR4C6Q8NH72 309 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 GPBAR1Q8TDU6 330 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 SCG3Q8WXD2 468 aaKnown RBP13.77□□□□□ -0.21
SEC13-202ENST00000350697 SEC14L1Q92503 715 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 ZNF669Q96BR6 464 aaPredicted RBP13.77□□□□□ -0.21
SEC13-202ENST00000350697 LRRC39Q96DD0 335 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 DCUN1D1Q96GG9 259 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 TTC1Q99614 292 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 EBNA1BP2Q99848 306 aaKnown RBP13.77□□□□□ -0.21
SEC13-202ENST00000350697 NAT9Q9BTE0 207 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 DUSP23Q9BVJ7 150 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 GSDMCQ9BYG8 508 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 SLC32A1Q9H598 525 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 NLGN3Q9NZ94 848 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 PCOLCE2Q9UKZ9 415 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 DOLKQ9UPQ8 538 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 RPS6KL1Q9Y6S9 549 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 IGLV3-16A0A075B6K0 115 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 YY2O15391 372 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 CBFA2T3O75081 653 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 USP1O94782 785 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 VAPBO95292 243 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 TTC4O95801 387 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 POLBP06746 335 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 CELA2BP08218 269 aaPredicted RBP13.76□□□□□ -0.21
SEC13-202ENST00000350697 GIMD1P0DJR0 217 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 PGAM1P18669 254 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 PPARGP37231 505 aaPredicted RBP13.76□□□□□ -0.21
SEC13-202ENST00000350697 CTBSQ01459 385 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 TCEA2Q15560 299 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 DBN1Q16643 649 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 DEFB133Q30KQ1 61 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 AARS2Q5JTZ9 985 aaKnown RBP13.76□□□□□ -0.21
SEC13-202ENST00000350697 LYPLAL1Q5VWZ2 237 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 CRTC3Q6UUV7 619 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 CERS6Q6ZMG9 384 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 MICALCLQ6ZW33 695 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 LRRTM4Q86VH4 590 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 TRAPPC5Q8IUR0 188 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 CCNJLQ8IV13 435 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 RASGEF1AQ8N9B8 481 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 UBXN4Q92575 508 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 ART4Q93070 314 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 ZNF514Q96K75 400 aaPredicted RBP13.76□□□□□ -0.21
SEC13-202ENST00000350697 PWWP2AQ96N64 755 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 FCRL3Q96P31 734 aaPredicted RBP13.76□□□□□ -0.21
SEC13-202ENST00000350697 CATSPERZQ9NTU4 200 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 DLL3Q9NYJ7 618 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 GPR34Q9UPC5 381 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 PRKAB1Q9Y478 270 aa13.76□□□□□ -0.21
SEC13-202ENST00000350697 PCYT1BQ9Y5K3 369 aaPredicted RBP13.76□□□□□ -0.21
SEC13-202ENST00000350697 ARHGEF17Q96PE2 2063 aaPredicted RBP13.76□□□□□ -0.21
SEC13-202ENST00000350697 ZFC3H1O60293 1989 aaKnown RBP13.75□□□□□ -0.21
SEC13-202ENST00000350697 ZCWPW2A0A1B0GU75 182 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 ESYT3A0FGR9 886 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 E7ESA3 106 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 TRIM38O00635 465 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 KMOO15229 486 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 CD3EAPO15446 510 aaKnown RBP13.75□□□□□ -0.21
SEC13-202ENST00000350697 BANF1O75531 89 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 ARNTP27540 789 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 ARCN1P48444 511 aaKnown RBP13.75□□□□□ -0.21
SEC13-202ENST00000350697 CTSCP53634 463 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 PLTPP55058 493 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 B4GALNT1Q00973 533 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 GUCY2DQ02846 1103 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 CBLBQ13191 982 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 ITIH4Q14624 930 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 TMEM220Q6QAJ8 160 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 CENPUQ71F23 418 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 CHST15Q7LFX5 561 aaPredicted RBP13.75□□□□□ -0.21
SEC13-202ENST00000350697 NRROSQ86YC3 692 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 ZNF547Q8IVP9 402 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 DEFB124Q8NES8 71 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 CCL4L1Q8NHW4 92 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 BAHD1Q8TBE0 780 aaPredicted RBP13.75□□□□□ -0.21
SEC13-202ENST00000350697 CAMK1GQ96NX5 476 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 CDC6Q99741 560 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 TRIM56Q9BRZ2 755 aaKnown RBP13.75□□□□□ -0.21
SEC13-202ENST00000350697 DMGDHQ9UI17 866 aaKnown RBP13.75□□□□□ -0.21
SEC13-202ENST00000350697 TEX264Q9Y6I9 313 aa13.75□□□□□ -0.21
SEC13-202ENST00000350697 COL5A1P20908 1838 aaPredicted RBP13.75□□□□□ -0.21
SEC13-202ENST00000350697 OR2AG2A6NM03 316 aa13.74□□□□□ -0.21
SEC13-202ENST00000350697 BHMG1C9JSJ3 638 aaPredicted RBP13.74□□□□□ -0.21
SEC13-202ENST00000350697 SIGLEC6O43699 453 aa13.74□□□□□ -0.21
SEC13-202ENST00000350697 ACP5P13686 325 aa13.74□□□□□ -0.21
SEC13-202ENST00000350697 ATP1B2P14415 290 aaPredicted RBP13.74□□□□□ -0.21
SEC13-202ENST00000350697 ZNF7P17097 686 aaPredicted RBP13.74□□□□□ -0.21
SEC13-202ENST00000350697 AK4P27144 223 aaPredicted RBP13.74□□□□□ -0.21
SEC13-202ENST00000350697 ELK3P41970 407 aa13.74□□□□□ -0.21
SEC13-202ENST00000350697 ACTR1BP42025 376 aa13.74□□□□□ -0.21
SEC13-202ENST00000350697 NSG1P42857 185 aa13.74□□□□□ -0.21
SEC13-202ENST00000350697 TTPAP49638 278 aa13.74□□□□□ -0.21
SEC13-202ENST00000350697 ACTR1AP61163 376 aa13.74□□□□□ -0.21
SEC13-202ENST00000350697 PDIA2Q13087 525 aaKnown RBP13.74□□□□□ -0.21
SEC13-202ENST00000350697 PUM1Q14671 1186 aaKnown RBP eCLIP13.74□□□□□ -0.21
SEC13-202ENST00000350697 CRYMQ14894 314 aa13.74□□□□□ -0.21
SEC13-202ENST00000350697 TRADDQ15628 312 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms