RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 GFM1Q96RP9 751 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 LGMNQ99538 433 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 ZYG11BQ9C0D3 744 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 C8orf33Q9H7E9 229 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 KCNN3Q9UGI6 736 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 MYL12BO14950 172 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 RFPL2O75678 378 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 HMGN1P05114 100 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 POLR2CP19387 275 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 NR4A2P43354 598 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 PTPN9P43378 593 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 PRKAG1P54619 331 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 IL2P60568 153 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 FMO1Q01740 532 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 USP39Q53GS9 565 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 CDC73Q6P1J9 531 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 XKR5Q6UX68 686 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 ASB15Q8WXK1 588 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 NDRG1Q92597 394 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 CENPIQ92674 756 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 PPP1R16AQ96I34 528 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 SOHLH2Q9NX45 425 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 PCDHGB3Q9Y5G1 929 aa11.02□□□□□ -0.65
SMARCE1-202ENST00000348513 A0A0A0MRY4 1105 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 CHURC1-FNTBB4DL54 471 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 FFAR3O14843 346 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 GPR42O15529 346 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 CXCL14O95715 111 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 CYP1A2P05177 515 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 SNRPD1P62314 119 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 HSDL1Q3SXM5 330 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 KLHL26Q53HC5 615 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 RNF145Q96MT1 663 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 SPATA13Q96N96 652 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 TRNT1Q96Q11 434 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 SEMA3CQ99985 751 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 GRIP1Q9Y3R0 1128 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 A8MV72 311 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 C1orf196B1AJZ1 125 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 MRASO14807 208 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 MATN1P21941 496 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 GPR1P46091 355 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 NOL9Q5SY16 702 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 C3orf33Q6P1S2 294 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 ZNF662Q6ZS27 426 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 LRRC55Q6ZSA7 311 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 OXR1Q8N573 874 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 ANKRD52Q8NB46 1076 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 DNAJA4Q8WW22 397 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 CLPTM1LQ96KA5 538 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 FAM126AQ9BYI3 521 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 MALT1Q9UDY8 824 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 PSME2Q9UL46 239 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 A0A087X1B8 175 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 FAM149AA5PLN7 773 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 PIGNO95427 931 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 ARF4P18085 180 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 PRKAR1BP31321 381 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 MEA1Q16626 185 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 ZIK1Q3SY52 487 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 UNC5AQ6ZN44 842 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 TRIM43Q96BQ3 446 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 MRIQ9BWK5 157 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 ACSL5Q9ULC5 683 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 NR2E3Q9Y5X4 410 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 MSI1O43347 362 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 LIASO43766 372 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 CNPP09543 421 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 COX7A2P14406 83 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 RPS3P23396 243 aaKnown RBP eCLIP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 CBX5P45973 191 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 PCID2Q5JVF3 399 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 KHDRBS2Q5VWX1 349 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 CNSTQ6PJW8 725 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 PLEKHG7Q6ZR37 379 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 FAM71AQ8IYT1 594 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 ZNF276Q8N554 614 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 NSMCE2Q96MF7 247 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 NUSAP1Q9BXS6 441 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 CERS4Q9HA82 394 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 NTN4Q9HB63 628 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 KLHL28Q9NXS3 571 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 RAB23Q9ULC3 237 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 PCDHGC3Q9UN70 934 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 PCDHA11Q9Y5I1 949 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 MAGED1Q9Y5V3 778 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 FADS2O95864 444 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 RPN2P04844 631 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 MMP3P08254 477 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 SMAD3P84022 425 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 SLC18A2Q05940 514 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 MAD2L1Q13257 205 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 COL9A3Q14050 684 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 SCIMPQ6UWF3 145 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 RBM15BQ8NDT2 890 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 ZNF347Q96SE7 839 aa11.01□□□□□ -0.65
SMARCE1-202ENST00000348513 NPIPA7E9PJI5 369 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 RGS14O43566 566 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 PPP1R11O60927 126 aaPredicted RBP11□□□□□ -0.65
SMARCE1-202ENST00000348513 APOC1P02654 83 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms