RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 LIMD1Q9UGP4 676 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 TNFSF13BQ9Y275 285 aa15.22■□□□□ 0.03
LMNA-201ENST00000347559 ISPDA4D126 451 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 EFCAB9A8MZ26 197 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 CRYZL1O95825 349 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 GOT2P00505 430 aaKnown RBP15.21■□□□□ 0.03
LMNA-201ENST00000347559 NTRK1P04629 796 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 GRK3P35626 688 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 NDUFV1P49821 464 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 EEFSECP57772 596 aaKnown RBP15.21■□□□□ 0.03
LMNA-201ENST00000347559 CDK5R2Q13319 367 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 RAPSNQ13702 412 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 SELPLGQ14242 412 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 ZFP69Q49AA0 526 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 CEP78Q5JTW2 689 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 NEK5Q6P3R8 708 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 ARHGAP36Q6ZRI8 547 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 LACC1Q8IV20 430 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 SLC2A14Q8TDB8 520 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 SH3RF2Q8TEC5 729 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 CITED4Q96RK1 184 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 TTYH2Q9BSA4 534 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 TRMOQ9BU70 441 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 FAM49AQ9H0Q0 323 aaPredicted RBP15.21■□□□□ 0.03
LMNA-201ENST00000347559 CARS2Q9HA77 564 aaKnown RBP15.21■□□□□ 0.03
LMNA-201ENST00000347559 SEMA4BQ9NPR2 832 aaPredicted RBP15.21■□□□□ 0.03
LMNA-201ENST00000347559 NRXN2Q9P2S2 1712 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 A0A1B0GTL3 188 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 GSTA4O15217 222 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 ICMTO60725 284 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 PGLSO95336 258 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 MT-ND2P03891 347 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 CD36P16671 472 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 DNAJB1P25685 340 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 FOXM1Q08050 763 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 PCSK7Q16549 785 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 SIGIRRQ6IA17 410 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 GDPD3Q7L5L3 318 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 TRHDEQ9UKU6 1024 aa15.21■□□□□ 0.03
LMNA-201ENST00000347559 DFFAO00273 331 aa15.21■□□□□ 0.02
LMNA-201ENST00000347559 PEX10O60683 326 aa15.21■□□□□ 0.02
LMNA-201ENST00000347559 MITFO75030 526 aaPredicted RBP15.21■□□□□ 0.02
LMNA-201ENST00000347559 FYNP06241 537 aa15.21■□□□□ 0.02
LMNA-201ENST00000347559 ANXA6P08133 673 aa15.21■□□□□ 0.02
LMNA-201ENST00000347559 FMO4P31512 558 aa15.21■□□□□ 0.02
LMNA-201ENST00000347559 LAPTM4AQ15012 233 aa15.21■□□□□ 0.02
LMNA-201ENST00000347559 CRY1Q16526 586 aa15.21■□□□□ 0.02
LMNA-201ENST00000347559 GALNT12Q8IXK2 581 aa15.21■□□□□ 0.02
LMNA-201ENST00000347559 C2CD4AQ8NCU7 369 aaPredicted RBP15.21■□□□□ 0.02
LMNA-201ENST00000347559 PABPC5Q96DU9 382 aaKnown RBP15.21■□□□□ 0.02
LMNA-201ENST00000347559 LEF1Q9UJU2 399 aaPredicted RBP15.21■□□□□ 0.02
LMNA-201ENST00000347559 PCDHGA10Q9Y5H3 936 aa15.21■□□□□ 0.02
LMNA-201ENST00000347559 ZNF831Q5JPB2 1677 aa15.21■□□□□ 0.02
LMNA-201ENST00000347559 LY75O60449 1722 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 GOLGA8CPA6NN73 597 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 CENPXA8MT69 81 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 BCKDKO14874 412 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 SCO2O43819 266 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 CYP2C8P10632 490 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 LMO2P25791 158 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 HTR1EP28566 365 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 KRT6CP48668 564 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 OR2B6P58173 313 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 YWHAHQ04917 246 aaPredicted RBP15.2■□□□□ 0.02
LMNA-201ENST00000347559 MBTD1Q05BQ5 628 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 EPS8Q12929 822 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 SMN1Q16637 294 aaKnown RBP15.2■□□□□ 0.02
LMNA-201ENST00000347559 ZNF181Q2M3W8 571 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 ZNF404Q494X3 552 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 EFCAB12Q6NXP0 572 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 LINC00299Q6ZSB3 139 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 PHYKPLQ8IUZ5 450 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 BEND7Q8N7W2 519 aaPredicted RBP15.2■□□□□ 0.02
LMNA-201ENST00000347559 ZNF540Q8NDQ6 660 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 YIPF6Q96EC8 236 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 C8orf37Q96NL8 207 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 CRYL1Q9Y2S2 319 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 LRRC37AA6NMS7 1700 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 BTAF1O14981 1849 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 FAM92AA1XBS5 289 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 TBKBP1A7MCY6 615 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 AP3D1O14617 1153 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 USP2O75604 605 aaPredicted RBP15.2■□□□□ 0.02
LMNA-201ENST00000347559 SLC22A3O75751 556 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 ALX3O95076 343 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 MATN4O95460 622 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 CYBBP04839 570 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 LCKP06239 509 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 PAMP19021 973 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 MASP1P48740 699 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 CLCNKBP51801 687 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 GNG2P59768 71 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 HERVK_113P63132 956 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 LY6KQ17RY6 165 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 VARS2Q5ST30 1063 aaKnown RBP15.2■□□□□ 0.02
LMNA-201ENST00000347559 HECTD2Q5U5R9 776 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 OTUD1Q5VV17 481 aaPredicted RBP15.2■□□□□ 0.02
LMNA-201ENST00000347559 AGAP6Q5VW22 663 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 HFE2Q6ZVN8 426 aa15.2■□□□□ 0.02
LMNA-201ENST00000347559 BNIPLQ7Z465 357 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms