RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.8□□□□□ -0.68
CLCN6-202ENST00000346436 LAPTM5Q13571 262 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 ELOCQ15369 112 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 LIPMQ5VYY2 423 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 MACC1Q6ZN28 852 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 ARHGAP22Q7Z5H3 698 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 DNAJB14Q8TBM8 379 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 FIG4Q92562 907 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 HHIPL1Q96JK4 782 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 QKIQ96PU8 341 aaKnown RBP eCLIP10.8□□□□□ -0.68
CLCN6-202ENST00000346436 GKN1Q9NS71 199 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 EXD2Q9NVH0 621 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 PADI2Q9Y2J8 665 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 PCDHB1Q9Y5F3 818 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 AHCYL1O43865 530 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 CCDC159P0C7I6 412 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 TFEBP19484 476 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 CCKBRP32239 447 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 SSR2P43308 183 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 CLCN5P51795 746 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 RAB10P61026 200 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 PPIDQ08752 370 aaKnown RBP10.8□□□□□ -0.68
CLCN6-202ENST00000346436 PWP1Q13610 501 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 SOWAHAQ2M3V2 549 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 FSTL4Q6MZW2 842 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 SLC9B2Q86UD5 537 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 TMEM132CQ8N3T6 1108 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 NXNL1Q96CM4 212 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 HAPLN2Q9GZV7 340 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 SEMA3GQ9NS98 782 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 NDUFA13Q9P0J0 144 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 CA14Q9ULX7 337 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 SIPA1L3O60292 1781 aaPredicted RBP10.8□□□□□ -0.68
CLCN6-202ENST00000346436 FAM221BA6H8Z2 402 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 PITPNM1O00562 1244 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 CLEC3AO75596 197 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 CHRNGP07510 517 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 TPSB2P20231 275 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 TPSAB1Q15661 275 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 ENPP7Q6UWV6 458 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 ADCK1Q86TW2 530 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 CRELD1Q96HD1 420 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 C5orf34Q96MH7 638 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 FAM192AQ9GZU8 254 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 SLITRK2Q9H156 845 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 SSU72Q9NP77 194 aaKnown RBP10.8□□□□□ -0.68
CLCN6-202ENST00000346436 PPM1HQ9ULR3 514 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 GABRQQ9UN88 632 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 C15orf38-AP3S2A0A0A6YYH1 394 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 KRT75O95678 551 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 MT-CYBP00156 380 aaPredicted RBP10.8□□□□□ -0.68
CLCN6-202ENST00000346436 FASP25445 335 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 NMBRP28336 390 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 ALDH4A1P30038 563 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 HSD17B2P37059 387 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 MSLNQ13421 630 aaPredicted RBP10.8□□□□□ -0.68
CLCN6-202ENST00000346436 ARL13AQ5H913 290 aaPredicted RBP10.8□□□□□ -0.68
CLCN6-202ENST00000346436 CERS6Q6ZMG9 384 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 ARPINQ7Z6K5 226 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 CAMK1DQ8IU85 385 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 SAMD14Q8IZD0 417 aaPredicted RBP10.8□□□□□ -0.68
CLCN6-202ENST00000346436 FNDC5Q8NAU1 212 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 ZNF563Q8TA94 476 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 TAPBPLQ9BX59 468 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 PALMDQ9NP74 551 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 SIRPGQ9P1W8 387 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 EDARQ9UNE0 448 aa10.8□□□□□ -0.68
CLCN6-202ENST00000346436 B4DGG1 531 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 MLLT3P42568 568 aaPredicted RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 CREB5Q02930 508 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 TRAF2Q12933 501 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 ZIK1Q3SY52 487 aaPredicted RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 KCTD21Q4G0X4 260 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 MTX3Q5HYI7 312 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 DENND6AQ8IWF6 608 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 NIPA2Q8N8Q9 360 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 NPLOC4Q8TAT6 608 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 NDC1Q9BTX1 674 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 FBRSQ9HAH7 460 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 FBXL12Q9NXK8 326 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 USE1Q9NZ43 259 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 EVLQ9UI08 416 aaPredicted RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 CORO2BQ9UQ03 480 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 TRAFD1O14545 582 aaPredicted RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 CLOCKO15516 846 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 TYROBPO43914 113 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 WARSP23381 471 aaKnown RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 STXBP1P61764 594 aaKnown RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 SLC5A9Q2M3M2 681 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 SLC9B1Q4ZJI4 515 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 ARSJQ5FYB0 599 aaPredicted RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 XKR6Q5GH73 641 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 LDLRAP1Q5SW96 308 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 GALNT18Q6P9A2 607 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 WDTC1Q8N5D0 677 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 PTGR2Q8N8N7 351 aaPredicted RBP10.79□□□□□ -0.68
CLCN6-202ENST00000346436 RASGEF1AQ8N9B8 481 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 RIN3Q8TB24 985 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 LMX1AQ8TE12 382 aa10.79□□□□□ -0.68
CLCN6-202ENST00000346436 SYT11Q9BT88 431 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms