RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 YY2O15391 372 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 BUD23O43709 281 aaKnown RBP13.67□□□□□ -0.22
TPM4-202ENST00000344824 ACP1P24666 158 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 SSTR1P30872 391 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 TRIM23P36406 574 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 HSD17B3P37058 310 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 NR0B2Q15466 257 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 UAP1Q16222 522 aaPredicted RBP13.67□□□□□ -0.22
TPM4-202ENST00000344824 PCID2Q5JVF3 399 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 TMPRSS7Q7RTY8 843 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 ZNF669Q96BR6 464 aaPredicted RBP13.67□□□□□ -0.22
TPM4-202ENST00000344824 LRRC39Q96DD0 335 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 LYSMD1Q96S90 227 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 TMEM168Q9H0V1 697 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 ZFYVE1Q9HBF4 777 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 CHRAC1Q9NRG0 131 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 SUFUQ9UMX1 484 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 GPR34Q9UPC5 381 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 TCAF1Q9Y4C2 921 aa13.67□□□□□ -0.22
TPM4-202ENST00000344824 ZNF106Q9H2Y7 1883 aaKnown RBP13.67□□□□□ -0.22
TPM4-202ENST00000344824 RIPK2O43353 540 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 DKK1O94907 266 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 CKMT1AP12532 417 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 JUPP14923 745 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 PGAM1P18669 254 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 NMBRP28336 390 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 POLD2P49005 469 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 GPX6P59796 221 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 TMPRSS15P98073 1019 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 ST3GAL2Q16842 350 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 GUSBP11Q6P575 273 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 UNC5AQ6ZN44 842 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 TRMT10CQ7L0Y3 403 aaKnown RBP13.66□□□□□ -0.22
TPM4-202ENST00000344824 ZNF765Q7L2R6 523 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 EFL1Q7Z2Z2 1120 aaKnown RBP13.66□□□□□ -0.22
TPM4-202ENST00000344824 GLT6D1Q7Z4J2 308 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 SLC35F3Q8IY50 421 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 KYQ8NBH2 561 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 MAPK15Q8TD08 544 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 TBATAQ96M53 351 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 TTC25Q96NG3 672 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 SPATA16Q9BXB7 569 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 TEX101Q9BY14 249 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 ABCG4Q9H172 646 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 FAM83DQ9H4H8 585 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 LRRC4CQ9HCJ2 640 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.66□□□□□ -0.227e-9■□□□□ 10.4
TPM4-202ENST00000344824 SOX13Q9UN79 622 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 TMEM98Q9Y2Y6 226 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 KCTD3Q9Y597 815 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 ARL5AQ9Y689 179 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 RPS6KL1Q9Y6S9 549 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 UNC13CQ8NB66 2214 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 KIF26BQ2KJY2 2108 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 WDFY3Q8IZQ1 3526 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 CACNA1BQ00975 2339 aa13.66□□□□□ -0.22
TPM4-202ENST00000344824 LY6G6EA0A0G2JKS1 128 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 HEATR9A2RTY3 570 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 TPP1O14773 563 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 TNFRSF10CO14798 259 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 AURKAO14965 403 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 TTC4O95801 387 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 SOD1P00441 154 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 PYGLP06737 847 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 ADRA1DP25100 572 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 SPINT3P49223 89 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 RPIAP49247 311 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 DPTQ07507 201 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 ILKQ13418 452 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 PTPRCAPQ14761 206 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 ADAMTSL4Q6UY14 1074 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 C3orf62Q6ZUJ4 267 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 MICALCLQ6ZW33 695 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 RELL1Q8IUW5 271 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 NRSN1Q8IZ57 195 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 CBARPQ8N350 705 aaPredicted RBP13.65□□□□□ -0.22
TPM4-202ENST00000344824 MREGQ8N565 214 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 FAM181AQ8N9Y4 354 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 CCL4L1Q8NHW4 92 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 PTCD2Q8WV60 388 aaKnown RBP13.65□□□□□ -0.22
TPM4-202ENST00000344824 ZCCHC14Q8WYQ9 949 aaKnown RBP13.65□□□□□ -0.22
TPM4-202ENST00000344824 GATA6Q92908 595 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 MFSD3Q96ES6 412 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 HIC2Q96JB3 615 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 ZNF778Q96MU6 729 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 EPB41L4BQ9H329 900 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 BPIFA1Q9NP55 256 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 IL1RAPL1Q9NZN1 696 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 NCKIPSDQ9NZQ3 722 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 SLC2A6Q9UGQ3 507 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 GPSM3Q9Y4H4 160 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 DGKBQ9Y6T7 804 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 U3KQA8 63 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 ACACAQ13085 2346 aa13.65□□□□□ -0.22
TPM4-202ENST00000344824 CCL22O00626 93 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 CEACAM5P06731 702 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 POLBP06746 335 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 HOXC4P09017 264 aaPredicted RBP13.64□□□□□ -0.23
TPM4-202ENST00000344824 CDK4P11802 303 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 ILF3Q12906 894 aaKnown RBP eCLIP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms