RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 PBX4Q9BYU1 374 aa18.43■□□□□ 0.54
HOXA9-201ENST00000343483 ZNF385DQ9H6B1 395 aa18.43■□□□□ 0.54
HOXA9-201ENST00000343483 S100A14Q9HCY8 104 aa18.43■□□□□ 0.54
HOXA9-201ENST00000343483 TSR3Q9UJK0 312 aaKnown RBP18.43■□□□□ 0.54
HOXA9-201ENST00000343483 TRAF6Q9Y4K3 522 aa18.43■□□□□ 0.54
HOXA9-201ENST00000343483 A0A1W2PPC1 479 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 SYCE1LA8MT33 242 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 ZNF7P17097 686 aaPredicted RBP18.42■□□□□ 0.54
HOXA9-201ENST00000343483 CD9P21926 228 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 SPAM1P38567 509 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 BLMHQ13867 455 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 CYLC2Q14093 348 aaPredicted RBP18.42■□□□□ 0.54
HOXA9-201ENST00000343483 CCNIQ14094 377 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 CHRNA6Q15825 494 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 FBXO48Q5FWF7 155 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 LRRC73Q5JTD7 316 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 LRRC66Q68CR7 880 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 ANO7Q6IWH7 933 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 UGT3A1Q6NUS8 523 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 C12orf76Q8N812 135 aaPredicted RBP18.42■□□□□ 0.54
HOXA9-201ENST00000343483 CHST14Q8NCH0 376 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 SORCS1Q8WY21 1168 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 ECHDC3Q96DC8 303 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 SCRN2Q96FV2 425 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 MAELQ96JY0 434 aaKnown RBP18.42■□□□□ 0.54
HOXA9-201ENST00000343483 DPP7Q9UHL4 492 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 CRLS1Q9UJA2 301 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 PCDHB1Q9Y5F3 818 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 CCDC189A1A4V9 331 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 LIN7AO14910 233 aaPredicted RBP18.42■□□□□ 0.54
HOXA9-201ENST00000343483 POLR2EP19388 210 aaKnown RBP18.42■□□□□ 0.54
HOXA9-201ENST00000343483 EEF1DP29692 281 aaKnown RBP18.42■□□□□ 0.54
HOXA9-201ENST00000343483 ADSLP30566 484 aaPredicted RBP18.42■□□□□ 0.54
HOXA9-201ENST00000343483 CLCN7P51798 805 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 GPM6BQ13491 265 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 DMC1Q14565 340 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 TCHHL1Q5QJ38 904 aaPredicted RBP18.42■□□□□ 0.54
HOXA9-201ENST00000343483 TMEM215Q68D42 235 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 GRAMD4Q6IC98 578 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 TPRG1Q6ZUI0 275 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 ADGRD2Q7Z7M1 963 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 RBFAQ8N0V3 343 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 SLC26A7Q8TE54 656 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 CYB5D2Q8WUJ1 264 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 PYDC1Q8WXC3 89 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 JADE3Q92613 823 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 OTUB2Q96DC9 234 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 NSUN5Q96P11 429 aaKnown RBP18.42■□□□□ 0.54
HOXA9-201ENST00000343483 LYSMD1Q96S90 227 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 CPEB1Q9BZB8 566 aaKnown RBP18.42■□□□□ 0.54
HOXA9-201ENST00000343483 CERS4Q9HA82 394 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 POMPQ9Y244 141 aa18.42■□□□□ 0.54
HOXA9-201ENST00000343483 YBX2Q9Y2T7 364 aaKnown RBP18.42■□□□□ 0.54
HOXA9-201ENST00000343483 EIF4E1BA6NMX2 242 aaKnown RBP18.41■□□□□ 0.54
HOXA9-201ENST00000343483 PPP6CO00743 305 aa18.41■□□□□ 0.54
HOXA9-201ENST00000343483 CHRM1P11229 460 aaPredicted RBP18.41■□□□□ 0.54
HOXA9-201ENST00000343483 ITGB6P18564 788 aa18.41■□□□□ 0.54
HOXA9-201ENST00000343483 ACRV1P26436 265 aa18.41■□□□□ 0.54
HOXA9-201ENST00000343483 RECQLP46063 649 aaPredicted RBP18.41■□□□□ 0.54
HOXA9-201ENST00000343483 MTTPP55157 894 aa18.41■□□□□ 0.54
HOXA9-201ENST00000343483 SH3BP2P78314 561 aa18.41■□□□□ 0.54
HOXA9-201ENST00000343483 GEN1Q17RS7 908 aa18.41■□□□□ 0.54
HOXA9-201ENST00000343483 C16orf89Q6UX73 402 aa18.41■□□□□ 0.54
HOXA9-201ENST00000343483 AHI1Q8N157 1196 aa18.41■□□□□ 0.54
HOXA9-201ENST00000343483 CLDN19Q8N6F1 224 aa18.41■□□□□ 0.54
HOXA9-201ENST00000343483 CEP70Q8NHQ1 597 aa18.41■□□□□ 0.54
HOXA9-201ENST00000343483 SMG7Q92540 1137 aaKnown RBP18.41■□□□□ 0.54
HOXA9-201ENST00000343483 ZNF641Q96N77 438 aaPredicted RBP18.41■□□□□ 0.54
HOXA9-201ENST00000343483 CIPCQ9C0C6 399 aa18.41■□□□□ 0.54
HOXA9-201ENST00000343483 MEAF6Q9HAF1 191 aa18.41■□□□□ 0.54
HOXA9-201ENST00000343483 MID1IP1Q9NPA3 183 aa18.41■□□□□ 0.54
HOXA9-201ENST00000343483 LRCH1Q9Y2L9 728 aa18.41■□□□□ 0.54
HOXA9-201ENST00000343483 MYOFQ9NZM1 2061 aa18.41■□□□□ 0.54
HOXA9-201ENST00000343483 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.4■□□□□ 0.54
HOXA9-201ENST00000343483 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.4■□□□□ 0.54
HOXA9-201ENST00000343483 SLC9A3R1O14745 358 aaPredicted RBP18.4■□□□□ 0.54
HOXA9-201ENST00000343483 SATB1Q01826 763 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 TMC5Q6UXY8 1006 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 Q7L0L9 218 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 KBTBD2Q8IY47 623 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 KYQ8NBH2 561 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 GPR26Q8NDV2 337 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 OR2A12Q8NGT7 310 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 TRPC4APQ8TEL6 797 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 LRRC3BQ96PB8 259 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 ZNF184Q99676 751 aaPredicted RBP18.4■□□□□ 0.54
HOXA9-201ENST00000343483 C19orf43Q9BQ61 176 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 ZMYM5Q9UJ78 669 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 GNPTGQ9UJJ9 305 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 ERVW-1Q9UQF0 538 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 COPG1Q9Y678 874 aaKnown RBP18.4■□□□□ 0.54
HOXA9-201ENST00000343483 ARSAP15289 507 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 LHCGRP22888 699 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 HERC3Q15034 1050 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 GPSM1Q86YR5 675 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 DSELQ8IZU8 1212 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 HIPK4Q8NE63 616 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 RCN3Q96D15 328 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 KLHL32Q96NJ5 620 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 ASB2Q96Q27 587 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms