RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 PCDH12Q9NPG4 1184 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 HPS4Q9NQG7 708 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 THG1LQ9NWX6 298 aaKnown RBP19.78■□□□□ 0.76
RTN1-202ENST00000342503 ZDHHC3Q9NYG2 299 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 PKD2L2Q9NZM6 624 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 DEC1Q9P2X7 70 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 CD84Q9UIB8 345 aa19.78■□□□□ 0.76
RTN1-202ENST00000342503 CCDC189A1A4V9 331 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 UPK3BL1B0FP48 263 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 UPK3BL2E5RIL1 263 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 KLK8O60259 260 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 ATP6V1G2O95670 118 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 HK3P52790 923 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 PDGFRLQ15198 375 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 ZNF805Q5CZA5 627 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 NXNQ6DKJ4 435 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 GPSM1Q86YR5 675 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 POU5F2Q8N7G0 328 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 MRPL38Q96DV4 380 aaKnown RBP19.77■□□□□ 0.76
RTN1-202ENST00000342503 LRIG1Q96JA1 1093 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 MAELQ96JY0 434 aaKnown RBP19.77■□□□□ 0.76
RTN1-202ENST00000342503 NSUN5Q96P11 429 aaKnown RBP19.77■□□□□ 0.76
RTN1-202ENST00000342503 TSR3Q9UJK0 312 aaKnown RBP19.77■□□□□ 0.76
RTN1-202ENST00000342503 PLA2G4CQ9UP65 541 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 TRAF6Q9Y4K3 522 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 PIKFYVEQ9Y2I7 2098 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 PLXNA2O75051 1894 aa19.77■□□□□ 0.76
RTN1-202ENST00000342503 NCF1BA6NI72 391 aaPredicted RBP19.76■□□□□ 0.75
RTN1-202ENST00000342503 NCF1CA8MVU1 366 aaPredicted RBP19.76■□□□□ 0.75
RTN1-202ENST00000342503 NCF1P14598 390 aaPredicted RBP19.76■□□□□ 0.75
RTN1-202ENST00000342503 ZNF30P17039 623 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 KLF10Q13118 480 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 RIPK1Q13546 671 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 NAA25Q14CX7 972 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 POM121L1PQ3SYA9 428 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 FAM219BQ5XKK7 198 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 SYCE2Q6PIF2 218 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 VITQ6UXI7 678 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 HSD11B1LQ7Z5J1 315 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 TMPRSS6Q8IU80 811 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 PPP2R3CQ969Q6 453 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 ULK4Q96C45 1275 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 ASB2Q96Q27 587 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 ABCG8Q9H221 673 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 DKK3Q9UBP4 350 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 G3BP2Q9UN86 482 aaKnown RBP19.76■□□□□ 0.75
RTN1-202ENST00000342503 STX16-NPEPL1H3BU86 382 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 STX16O14662 325 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 NSG1P42857 185 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 SH3BP2P78314 561 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 HYAL1Q12794 435 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 FNDC3BQ53EP0 1204 aaKnown RBP19.76■□□□□ 0.75
RTN1-202ENST00000342503 FBXO48Q5FWF7 155 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 CLEC6AQ6EIG7 209 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 ANKRD54Q6NXT1 300 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 TMEM184AQ6ZMB5 413 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 RBM15BQ8NDT2 890 aaKnown RBP19.76■□□□□ 0.75
RTN1-202ENST00000342503 FAM13CQ8NE31 585 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 HCAR2Q8TDS4 363 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 COPS8Q99627 209 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 MEAF6Q9HAF1 191 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 ZFP14Q9HCL3 533 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 BAIAP2L1Q9UHR4 511 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 CDH7Q9ULB5 785 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 TMCO1Q9UM00 188 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 ANKRD12Q6UB98 2062 aa19.76■□□□□ 0.75
RTN1-202ENST00000342503 TCF20Q9UGU0 1960 aaKnown RBP19.75■□□□□ 0.75
RTN1-202ENST00000342503 C16orf96A6NNT2 1141 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 PPP6CO00743 305 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 CDK14O94921 469 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 RPS17P08708 135 aaKnown RBP19.75■□□□□ 0.75
RTN1-202ENST00000342503 XPAP23025 273 aaPredicted RBP19.75■□□□□ 0.75
RTN1-202ENST00000342503 B4GALNT1Q00973 533 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 SATB1Q01826 763 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 SNCBQ16143 134 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 GPRC6AQ5T6X5 926 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 TMEM198Q66K66 360 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 ANKS6Q68DC2 871 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 TXNDC11Q6PKC3 985 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 KIRREL3Q8IZU9 778 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 ZBTB2Q8N680 514 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 CPSF7Q8N684 471 aaKnown RBP19.75■□□□□ 0.75
RTN1-202ENST00000342503 TRPC4APQ8TEL6 797 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 CATSPER2Q96P56 530 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 SPATA16Q9BXB7 569 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 ZNF385DQ9H6B1 395 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 MID1IP1Q9NPA3 183 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 CD274Q9NZQ7 290 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 TMPRSS11EQ9UL52 423 aa19.75■□□□□ 0.75
RTN1-202ENST00000342503 MEI4A8MW99 385 aa19.74■□□□□ 0.75
RTN1-202ENST00000342503 SNX2O60749 519 aa19.74■□□□□ 0.75
RTN1-202ENST00000342503 HLA-EP13747 358 aa19.74■□□□□ 0.75
RTN1-202ENST00000342503 NFKBIAP25963 317 aa19.74■□□□□ 0.75
RTN1-202ENST00000342503 PRDX6P30041 224 aa19.74■□□□□ 0.75
RTN1-202ENST00000342503 RGS4P49798 205 aa19.74■□□□□ 0.75
RTN1-202ENST00000342503 AGTR2P50052 363 aa19.74■□□□□ 0.75
RTN1-202ENST00000342503 MXRA7P84157 204 aa19.74■□□□□ 0.75
RTN1-202ENST00000342503 CLCQ05315 142 aa19.74■□□□□ 0.75
RTN1-202ENST00000342503 RALGDSQ12967 914 aa19.74■□□□□ 0.75
RTN1-202ENST00000342503 ACSBG2Q5FVE4 666 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms