RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 KLC4Q9NSK0 619 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 GRHL1Q9NZI5 618 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 SLC17A6Q9P2U8 582 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 NFKBIL1Q9UBC1 381 aaPredicted RBP13.04□□□□□ -0.32
TUBD1-202ENST00000340993 FTSJ1Q9UET6 329 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 SLC23A2Q9UGH3 650 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 PCOLCE2Q9UKZ9 415 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 WDFY3Q8IZQ1 3526 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 TP73O15350 636 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 FLRT2O43155 660 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 NUAK1O60285 661 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 PCDHGA12O60330 932 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 HOXC4P09017 264 aaPredicted RBP13.04□□□□□ -0.32
TUBD1-202ENST00000340993 ACRV1P26436 265 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 RPL10P27635 214 aaKnown RBP13.04□□□□□ -0.32
TUBD1-202ENST00000340993 FOXN2P32314 431 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 DRG2P55039 364 aaKnown RBP13.04□□□□□ -0.32
TUBD1-202ENST00000340993 CSE1LP55060 971 aaKnown RBP13.04□□□□□ -0.32
TUBD1-202ENST00000340993 DAB2P98082 770 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 CACNG1Q06432 222 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 ILF3Q12906 894 aaKnown RBP eCLIP13.04□□□□□ -0.32
TUBD1-202ENST00000340993 PDIA2Q13087 525 aaKnown RBP13.04□□□□□ -0.32
TUBD1-202ENST00000340993 BRD3Q15059 726 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 ELOCQ15369 112 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 LDLRAP1Q5SW96 308 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 DUPD1Q68J44 220 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 KANSL1Q7Z3B3 1105 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 HOOK3Q86VS8 718 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 NLRP8Q86W28 1048 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 NRROSQ86YC3 692 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 IFT81Q8WYA0 676 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 FAM136AQ96C01 138 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 SIGLEC10Q96LC7 697 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 VPS35Q96QK1 796 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 COPS8Q99627 209 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 WDR83Q9BRX9 315 aaKnown RBP13.04□□□□□ -0.32
TUBD1-202ENST00000340993 RAB17Q9H0T7 212 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 SYNDIG1Q9H7V2 258 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 EPB41L5Q9HCM4 733 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 TREX1Q9NSU2 369 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 CATSPERZQ9NTU4 200 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 SPATS2LQ9NUQ6 558 aaKnown RBP13.04□□□□□ -0.32
TUBD1-202ENST00000340993 DMGDHQ9UI17 866 aaKnown RBP13.04□□□□□ -0.32
TUBD1-202ENST00000340993 TSR3Q9UJK0 312 aaKnown RBP13.04□□□□□ -0.32
TUBD1-202ENST00000340993 GPR34Q9UPC5 381 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 PRSS21Q9Y6M0 314 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 DGKBQ9Y6T7 804 aa13.04□□□□□ -0.32
TUBD1-202ENST00000340993 CPED1A4D0V7 1026 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 AGRPO00253 132 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 TNFRSF10CO14798 259 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 YKT6O15498 198 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 PIAS1O75925 651 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 EML2O95834 649 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 IVLP07476 585 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 GIMD1P0DJR0 217 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 ARNTP27540 789 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 ID4P47928 161 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 LIMK1P53667 647 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 ARL4CP56559 192 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 SIM1P81133 766 aaPredicted RBP13.03□□□□□ -0.32
TUBD1-202ENST00000340993 ANKRD20A4Q4UJ75 823 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 DNAJC21Q5F1R6 531 aaKnown RBP13.03□□□□□ -0.32
TUBD1-202ENST00000340993 PDPK2PQ6A1A2 396 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 LRRTM4Q86VH4 590 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 GKN2Q86XP6 184 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 ZNF547Q8IVP9 402 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 PDIK1LQ8N165 341 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 CEP112Q8N8E3 955 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 KYQ8NBH2 561 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 DDHD1Q8NEL9 900 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 FBXO25Q8TCJ0 367 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 KIFC1Q9BW19 673 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 SAYSD1Q9NPB0 183 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 PPANQ9NQ55 473 aaKnown RBP13.03□□□□□ -0.32
TUBD1-202ENST00000340993 C20orf96Q9NUD7 363 aaPredicted RBP13.03□□□□□ -0.32
TUBD1-202ENST00000340993 TAAR2Q9P1P5 351 aa13.03□□□□□ -0.32
TUBD1-202ENST00000340993 ASPMQ8IZT6 3477 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 UNC13CQ8NB66 2214 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 UBA6A0AVT1 1052 aaPredicted RBP13.02□□□□□ -0.32
TUBD1-202ENST00000340993 NEMP2A6NFY4 417 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 AP3B1O00203 1094 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 CD3EAPO15446 510 aaKnown RBP13.02□□□□□ -0.32
TUBD1-202ENST00000340993 LDOC1O95751 146 aaPredicted RBP13.02□□□□□ -0.32
TUBD1-202ENST00000340993 ZNF883P0CG24 379 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 ALPPL2P10696 532 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 MLNP12872 115 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 PMLP29590 882 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 MAGEA3P43357 314 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 ABCG1P45844 678 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 MAZP56270 477 aaKnown RBP13.02□□□□□ -0.32
TUBD1-202ENST00000340993 LAMB3Q13751 1172 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 TEX35Q5T0J7 233 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 NLRP9Q7RTR0 991 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 PIP4P1Q86T03 277 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 ZNF761Q86XN6 746 aaPredicted RBP13.02□□□□□ -0.32
TUBD1-202ENST00000340993 RAVER1Q8IY67 606 aaKnown RBP13.02□□□□□ -0.32
TUBD1-202ENST00000340993 ZBED8Q8IZ13 594 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 LILRA3Q8N6C8 439 aaPredicted RBP13.02□□□□□ -0.32
TUBD1-202ENST00000340993 FBXO36Q8NEA4 188 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 OR4C6Q8NH72 309 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms