RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 ALOX5P09917 674 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 CD1DP15813 335 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 BRCC3P46736 316 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 CD97P48960 835 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 ST13P50502 369 aaKnown RBP9.35□□□□□ -0.91
TRERF1-201ENST00000340840 CDKN2DP55273 166 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 SIRPB2Q5JXA9 342 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 MARCH8Q5T0T0 291 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 DENND5AQ6IQ26 1287 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 NIPAL1Q6NVV3 410 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 ARHGAP12Q8IWW6 846 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 HOMEZQ8IX15 550 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 ABI1Q8IZP0 508 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 SVOPQ8N4V2 548 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 RHEBL1Q8TAI7 183 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 FBXO32Q969P5 355 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 TMBIM1Q969X1 311 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 IMP4Q96G21 291 aaKnown RBP9.35□□□□□ -0.91
TRERF1-201ENST00000340840 PPP3R2Q96LZ3 170 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 MUS81Q96NY9 551 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 ACOX2Q99424 681 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 ZNHIT2Q9UHR6 403 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 INVSQ9Y283 1065 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 WDR37Q9Y2I8 494 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 PTGDR2Q9Y5Y4 395 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 CROCCQ5TZA2 2017 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 NPEPPSL1A6NEC2 478 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 EVPLLA8MZ36 301 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 IFRD1O00458 451 aaPredicted RBP9.35□□□□□ -0.91
TRERF1-201ENST00000340840 ALDOCP09972 364 aaKnown RBP9.35□□□□□ -0.91
TRERF1-201ENST00000340840 ZNF37AP17032 561 aaPredicted RBP9.35□□□□□ -0.91
TRERF1-201ENST00000340840 MLLT6P55198 1093 aaPredicted RBP9.35□□□□□ -0.91
TRERF1-201ENST00000340840 LDLRAP1Q5SW96 308 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 RAP1GAP2Q684P5 730 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 OGFOD2Q6N063 350 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 PRR23BQ6ZRT6 265 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 MILR1Q7Z6M3 343 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 ZNF467Q7Z7K2 595 aaPredicted RBP9.35□□□□□ -0.91
TRERF1-201ENST00000340840 MON1AQ86VX9 555 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 MFSD6LQ8IWD5 586 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 ZMIZ2Q8NF64 920 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 SKA2Q8WVK7 121 aaPredicted RBP9.35□□□□□ -0.91
TRERF1-201ENST00000340840 TRUB1Q8WWH5 349 aaKnown RBP9.35□□□□□ -0.91
TRERF1-201ENST00000340840 PSMG2Q969U7 264 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 C3orf30Q96M34 536 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 NODALQ96S42 347 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 GPR21Q99679 349 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 TRIM8Q9BZR9 551 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 SMOC2Q9H3U7 446 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 POPDC3Q9HBV1 291 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 STARD7Q9NQZ5 370 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 GMPR2Q9P2T1 348 aaKnown RBP9.35□□□□□ -0.91
TRERF1-201ENST00000340840 ADGRE2Q9UHX3 823 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 LRFN2Q9ULH4 789 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 TRPV2Q9Y5S1 764 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 DGKBQ9Y6T7 804 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 SCN1AP35498 2009 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 F5H5T6 163 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 NPPAP01160 153 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 HTR1EP28566 365 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 OXTRP30559 389 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 PBX3P40426 434 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 NFKB2Q00653 900 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 TRIM32Q13049 653 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 TIGD5Q53EQ6 642 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 PAQR3Q6TCH7 311 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 SLCO6A1Q86UG4 719 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 FUNDC1Q8IVP5 155 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 ZC3H7AQ8IWR0 971 aaKnown RBP9.35□□□□□ -0.91
TRERF1-201ENST00000340840 TMEM199Q8N511 208 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 BRSK1Q8TDC3 778 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 POP5Q969H6 163 aaKnown RBP9.35□□□□□ -0.91
TRERF1-201ENST00000340840 KIAA1191Q96A73 305 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 UBXN10Q96LJ8 280 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 AARSD1Q9BTE6 412 aaKnown RBP9.35□□□□□ -0.91
TRERF1-201ENST00000340840 ACTR8Q9H981 624 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 AIG1Q9NVV5 245 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 WWOXQ9NZC7 414 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 DNAJB9Q9UBS3 223 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 ST3GAL5Q9UNP4 418 aa9.35□□□□□ -0.91
TRERF1-201ENST00000340840 A0A1W2PQH9 124 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 RAD51BO15315 384 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 RGS14O43566 566 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 CNOT3O75175 753 aaKnown RBP9.34□□□□□ -0.91
TRERF1-201ENST00000340840 NDST3O95803 873 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 PKMP14618 531 aaKnown RBP9.34□□□□□ -0.91
TRERF1-201ENST00000340840 ARNTP27540 789 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 DCKP27707 260 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 TTPAP49638 278 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 UFM1P61960 85 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 NANOGP8Q6NSW7 305 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 FKBP9P1Q75LS8 142 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 SPRED1Q7Z699 444 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 HORMAD1Q86X24 394 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 P3H2Q8IVL5 708 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 TAMM41Q96BW9 452 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 LINGO1Q96FE5 620 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 NSUN5Q96P11 429 aaKnown RBP9.34□□□□□ -0.91
TRERF1-201ENST00000340840 APOL5Q9BWW9 433 aa9.34□□□□□ -0.91
TRERF1-201ENST00000340840 NANOGQ9H9S0 305 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms