RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 C12orf50Q8NA57 414 aaPredicted RBP13.78□□□□□ -0.2
PDE4D-203ENST00000340635 IGDCC4Q8TDY8 1250 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 HEXDCQ8WVB3 486 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 PGM2Q96G03 612 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 TUBGCP5Q96RT8 1024 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 ERVK-18Q9QC07 812 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 NR2E3Q9Y5X4 410 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 MATN2O00339 956 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 ETS2P15036 469 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 HDCP19113 662 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 PRKCHP24723 683 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 AZGP1P25311 298 aaKnown RBP13.78□□□□□ -0.2
PDE4D-203ENST00000340635 NDUFV1P49821 464 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 CA9Q16790 459 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 ARCQ7LC44 396 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 LPIN3Q9BQK8 851 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 NXF3Q9H4D5 531 aaKnown RBP13.78□□□□□ -0.2
PDE4D-203ENST00000340635 AP4B1Q9Y6B7 739 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 USP6P35125 1406 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 TNFRSF11BO00300 401 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 CTPS1P17812 591 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 CTNNB1P35222 781 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 TUBA1BP68363 451 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 AIMP2Q13155 320 aaKnown RBP13.78□□□□□ -0.2
PDE4D-203ENST00000340635 RRP1BQ14684 758 aaKnown RBP13.78□□□□□ -0.2
PDE4D-203ENST00000340635 TUBA1AQ71U36 451 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 TSPAN18Q96SJ8 248 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 NELFAQ9H3P2 528 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 CFAP97Q9P2B7 532 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 ZNF490Q9ULM2 529 aaPredicted RBP13.78□□□□□ -0.2
PDE4D-203ENST00000340635 ZNF726A6NNF4 738 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 BUD23O43709 281 aaKnown RBP13.78□□□□□ -0.2
PDE4D-203ENST00000340635 CSTBP04080 98 aaKnown RBP13.78□□□□□ -0.2
PDE4D-203ENST00000340635 PAX3P23760 479 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 RBL1P28749 1068 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 PRR5P85299 388 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 VCPIP1Q96JH7 1222 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 MFSD14AQ96MC6 490 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 CDH19Q9H159 772 aa13.78□□□□□ -0.2
PDE4D-203ENST00000340635 CLDN25C9JDP6 229 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 APOC4-APOC2K7ER74 178 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 APOC2P02655 101 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 UQCRC1P31930 480 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 BNIP1Q12981 228 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 RNASEH2BQ5TBB1 312 aaKnown RBP13.77□□□□□ -0.2
PDE4D-203ENST00000340635 UNC5AQ6ZN44 842 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 TMIEQ8NEW7 156 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 TRPM4Q8TD43 1214 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 PGLSO95336 258 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 ELP6Q0PNE2 266 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 C3orf33Q6P1S2 294 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 ZMIZ2Q8NF64 920 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 NINJ1Q92982 152 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 CNTNAP5Q8WYK1 1306 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 A0A0A0MRY4 1105 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 LPOP22079 712 aaPredicted RBP13.77□□□□□ -0.2
PDE4D-203ENST00000340635 DCDC1P59894 354 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 RBM18Q96H35 190 aaKnown RBP13.77□□□□□ -0.2
PDE4D-203ENST00000340635 SPATA13Q96N96 652 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 SLC5A7Q9GZV3 580 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 CROCC2H7BZ55 1655 aa13.77□□□□□ -0.2
PDE4D-203ENST00000340635 A0A0J9YVX5 310 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 PSEN2P49810 448 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 GRK1Q15835 563 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 USP30Q70CQ3 517 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 RDH11Q8TC12 318 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 ZNF606Q8WXB4 792 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 CLPTM1LQ96KA5 538 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 CRAMP1Q96RY5 1269 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 PRPF19Q9UMS4 504 aaKnown RBP13.77□□□□□ -0.21
PDE4D-203ENST00000340635 PTPRKQ15262 1439 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 AZIN1O14977 448 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 ARPC2O15144 300 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 ATG13O75143 517 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 IFI35P80217 286 aaPredicted RBP13.77□□□□□ -0.21
PDE4D-203ENST00000340635 ZNF571Q7Z3V5 609 aaPredicted RBP13.77□□□□□ -0.21
PDE4D-203ENST00000340635 CAND1Q86VP6 1230 aaKnown RBP13.77□□□□□ -0.21
PDE4D-203ENST00000340635 UNC5BQ8IZJ1 945 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 OR6K6Q8NGW6 343 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 SLC7A6OSQ96CW6 309 aaPredicted RBP13.77□□□□□ -0.21
PDE4D-203ENST00000340635 GDAP2Q9NXN4 497 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 PACSIN3Q9UKS6 424 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 SERPINA6P08185 405 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 MIPP30301 263 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 CRYBG2Q8N1P7 616 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 ALLCQ8N6M5 410 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 HJURPQ8NCD3 748 aaPredicted RBP13.77□□□□□ -0.21
PDE4D-203ENST00000340635 OR2T12Q8NG77 320 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 OR7D4Q8NG98 312 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 DMRTB1Q96MA1 342 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 RIPOR3Q96MK2 946 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 LYARQ9NX58 379 aaKnown RBP13.77□□□□□ -0.21
PDE4D-203ENST00000340635 NLRP1Q9C000 1473 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 GPR89AB7ZAQ6 455 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 GPR89BP0CG08 455 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 ZNF12P17014 697 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 C2orf73Q8N5S3 287 aaPredicted RBP13.77□□□□□ -0.21
PDE4D-203ENST00000340635 OR52J3Q8NH60 311 aa13.77□□□□□ -0.21
PDE4D-203ENST00000340635 CPNE2Q96FN4 548 aaPredicted RBP13.77□□□□□ -0.21
PDE4D-203ENST00000340635 HEPHQ9BQS7 1158 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms