RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 HHEXQ03014 270 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 INSCQ1MX18 579 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 PARP6Q2NL67 630 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 COL28A1Q2UY09 1125 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 ATP13A5Q4VNC0 1218 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 SEL1L2Q5TEA6 688 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 AADACL2Q6P093 401 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 IYDQ6PHW0 289 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 DDHD1Q8NEL9 900 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 OR4D9Q8NGE8 314 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 OR10G6Q8NH81 332 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 SLC35B2Q8TB61 432 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 CCDC110Q8TBZ0 833 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 SLC37A2Q8TED4 501 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 PATE1Q8WXA2 126 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 ZNF514Q96K75 400 aaPredicted RBP13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 TTC25Q96NG3 672 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 SLC38A3Q99624 504 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 GORASP1Q9BQQ3 440 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 FOXP3Q9BZS1 431 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 C10orf88Q9H8K7 445 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 ARNT2Q9HBZ2 717 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 KCNK4Q9NYG8 393 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 TBC1D29Q9UFV1 150 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 GUCA1BQ9UMX6 200 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 PRKAB1Q9Y478 270 aa13.16□□□□□ -0.3
SIRPB3P-201ENST00000340424 IGHV1OR21-1A0A087WYE8 117 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 A0A0U1RQJ8 604 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 A0A1W2PNU3 283 aaPredicted RBP13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 KLHL33A6NCF5 533 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 F5H423 210 aaPredicted RBP13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 CASC3O15234 703 aaKnown RBP13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 PPM1DO15297 605 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 PSMD3O43242 534 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 DUX1O43812 170 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 ZNF7P17097 686 aaPredicted RBP13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 CD1CP29017 333 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 STIP1P31948 543 aaKnown RBP13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 HADHAP40939 763 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 TMEM115Q12893 351 aaPredicted RBP13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 AMZ1Q400G9 498 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 BROXQ5VW32 411 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 C19orf48Q6RUI8 117 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 FAM151BQ6UXP7 276 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 WASH2PQ6VEQ5 465 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 FAM71DQ8N9W8 422 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 GDAP1Q8TB36 358 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 KCNE4Q8WWG9 221 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 MARVELD3Q96A59 401 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 RTP4Q96DX8 246 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 FAM118BQ9BPY3 351 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 TBL1YQ9BQ87 522 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 LRRC40Q9H9A6 602 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 UCK1Q9HA47 277 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 WASH6PQ9NQA3 447 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 KLC4Q9NSK0 619 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 ACSL6Q9UKU0 697 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 ATXN7L1Q9ULK2 861 aaPredicted RBP13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 KCNK6Q9Y257 313 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 LOXL2Q9Y4K0 774 aa13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 PCYT1BQ9Y5K3 369 aaPredicted RBP13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 DNMT3AQ9Y6K1 912 aaPredicted RBP13.15□□□□□ -0.3
SIRPB3P-201ENST00000340424 UNC13CQ8NB66 2214 aa13.15□□□□□ -0.31
SIRPB3P-201ENST00000340424 ZNF106Q9H2Y7 1883 aaKnown RBP13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 LOC400499M0QZD8 3231 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 ERI2A8K979 691 aaKnown RBP13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 NVLO15381 856 aaKnown RBP13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 PRAMEF1O95521 474 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 UGT1A5P35504 534 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 LIMK2P53671 638 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 TLE3Q04726 772 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 RPS6KA1Q15418 735 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 CHRNA6Q15825 494 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 PHF19Q5T6S3 580 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 AGAP9Q5VTM2 703 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 FOXR1Q6PIV2 292 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 WDR74Q6RFH5 385 aaPredicted RBP13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 PDZD3Q86UT5 571 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 TRAPPC5Q8IUR0 188 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 LRRC8AQ8IWT6 810 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 SPACA3Q8IXA5 215 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 RBM12BQ8IXT5 1001 aaKnown RBP13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 AHCYL2Q96HN2 611 aaKnown RBP13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 OSGEPL1Q9H4B0 414 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 RDH14Q9HBH5 336 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 ARFGAP3Q9NP61 516 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 CPNE7Q9UBL6 633 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 TMPRSS11EQ9UL52 423 aa13.14□□□□□ -0.31
SIRPB3P-201ENST00000340424 IGHV5-10-1A0A0J9YXX1 117 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 LILRA5A6NI73 299 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 PRR19A6NJB7 356 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 SNX2O60749 519 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 MTX2O75431 263 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 EML2O95834 649 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 XRCC1P18887 633 aaPredicted RBP13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 IDSP22304 550 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 CD82P27701 267 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 DMPKQ09013 629 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 LONRF2Q1L5Z9 754 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms