RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 SERPINA13PQ6UXR4 307 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 GET4Q7L5D6 327 aaPredicted RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 SNX32Q86XE0 403 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 SLC22A9Q8IVM8 553 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 FBXO39Q8N4B4 442 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 RNF148Q8N7C7 305 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 BEND7Q8N7W2 519 aaPredicted RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 OR52B6Q8NGF0 335 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 RHEBL1Q8TAI7 183 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 DTX3LQ8TDB6 740 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 ISG20Q96AZ6 181 aaKnown RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 CCDC124Q96CT7 223 aaKnown RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 L3HYPDHQ96EM0 354 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 PANX3Q96QZ0 392 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 TACO1Q9BSH4 297 aaKnown RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 CLPBQ9H078 707 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 STN1Q9H668 368 aaKnown RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 SYTL2Q9HCH5 934 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 CRLS1Q9UJA2 301 aa7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 CORO1CQ9ULV4 474 aaPredicted RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 HELZP42694 1942 aaKnown RBP7.32□□□□□ -1.24
SRFBP1-201ENST00000339397 C2orf16Q68DN1 1984 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 KRT36O76013 467 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 ESR1P03372 595 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 RB1P06400 928 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 LINC00032P0C843 101 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 ITGAXP20702 1163 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 DGKGP49619 791 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 COPAP53621 1224 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 ERVK-21P61565 698 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 CLCQ05315 142 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 CUL3Q13618 768 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 TANGO2Q6ICL3 276 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 SBSNQ6UWP8 590 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 GDPD4Q6W3E5 623 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 GK5Q6ZS86 529 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 KIAA0907Q7Z7F0 614 aaPredicted RBP7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 ULK2Q8IYT8 1036 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 DEFB107AQ8IZN7 70 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 NXPE1Q8N323 547 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 PCDH20Q8N6Y1 951 aaKnown RBP7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 NUDT8Q8WV74 236 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 PBXIP1Q96AQ6 731 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 MAELQ96JY0 434 aaKnown RBP7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 ASB16Q96NS5 453 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 TUBB6Q9BUF5 446 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 RPP25Q9BUL9 199 aaKnown RBP7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 NKX2-4Q9H2Z4 354 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 NSUN3Q9H649 340 aaKnown RBP7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 ZNF385DQ9H6B1 395 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 ZDHHC7Q9NXF8 308 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 TBC1D14Q9P2M4 693 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 EIF2B4Q9UI10 523 aaKnown RBP7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 DHRS7Q9Y394 339 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 TRBV5-4A0A0C4DH59 114 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 PYGLP06737 847 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 ALDOCP09972 364 aaKnown RBP7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 ADH5P11766 374 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 TIMP2P16035 220 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 PFKLP17858 780 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 SPAM1P38567 509 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 DPP6P42658 865 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 SPINT3P49223 89 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 YBX1P67809 324 aaKnown RBP7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 ASPHQ12797 758 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 KCNC3Q14003 757 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 GRB7Q14451 532 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 ACAD11Q709F0 780 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 SYVN1Q86TM6 617 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 CACUL1Q86Y37 369 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 GPSM1Q86YR5 675 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 HPS6Q86YV9 775 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 VRK3Q8IV63 474 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 SCUBE1Q8IWY4 988 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 CELF5Q8N6W0 485 aaKnown RBP7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 OSCP1Q8WVF1 389 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 FOXJ1Q92949 421 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 CCDC126Q96EE4 140 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 LYSMD1Q96S90 227 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 NPAS2Q99743 824 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 CPEB1Q9BZB8 566 aaKnown RBP7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 PLA2G2FQ9BZM2 168 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 AKTIPQ9H8T0 292 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 POPDC3Q9HBV1 291 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 PCDH12Q9NPG4 1184 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 ELOVL2Q9NXB9 296 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 CD274Q9NZQ7 290 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 CCDC167Q9P0B6 97 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 FBXO10Q9UK96 956 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 COQ6Q9Y2Z9 468 aa7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 TCF20Q9UGU0 1960 aaKnown RBP7.31□□□□□ -1.24
SRFBP1-201ENST00000339397 HEPACAM2A8MVW5 462 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 PIP5K1BO14986 540 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 ZNF7P17097 686 aaPredicted RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 ITGALP20701 1170 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 CCR7P32248 378 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 ADARP55265 1226 aaKnown RBP7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 SESN3P58005 492 aa7.3□□□□□ -1.24
SRFBP1-201ENST00000339397 RPL26P61254 145 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms