RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 DNMT3BQ9UBC3 853 aaKnown RBP10.71□□□□□ -0.69
RTN3-201ENST00000338850 CIDEBQ9UHD4 219 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 COMMD10Q9Y6G5 202 aa10.71□□□□□ -0.69
RTN3-201ENST00000338850 PTPRZ1P23471 2315 aaPredicted RBP10.7□□□□□ -0.7
RTN3-201ENST00000338850 DOCK6Q96HP0 2047 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 A0A1W2PQH9 124 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 PRR23AA6NEV1 266 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 PRORSD1PA6NEY8 169 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 OR6C75A6NL08 312 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 TMEM233B4DJY2 109 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 STK25O00506 426 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 PRAMEF11O60813 436 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 ABLIM3O94929 683 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 BMP10O95393 424 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 RPS17P08708 135 aaKnown RBP10.7□□□□□ -0.7
RTN3-201ENST00000338850 IDO1P14902 403 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 PCSK2P16519 638 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 HOXB6P17509 224 aaKnown RBP10.7□□□□□ -0.7
RTN3-201ENST00000338850 SAT1P21673 171 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 CHRNA4P43681 627 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 STC1P52823 247 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 INPP5AQ14642 412 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 ANGPT1Q15389 498 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 SLC5A9Q2M3M2 681 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 AGKQ53H12 422 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 MS4A13Q5J8X5 152 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 SIRPB2Q5JXA9 342 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 MTSS1LQ765P7 747 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 C14orf80Q86SX3 495 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 DHFR2Q86XF0 187 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 NPAS3Q8IXF0 933 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 BBS5Q8N3I7 341 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 PAPD5Q8NDF8 572 aaKnown RBP10.7□□□□□ -0.7
RTN3-201ENST00000338850 TNIP2Q8NFZ5 429 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 SCAMP5Q8TAC9 235 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 ZNF461Q8TAF7 563 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 C2orf15Q8WU43 125 aaKnown RBP10.7□□□□□ -0.7
RTN3-201ENST00000338850 LPGAT1Q92604 370 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 POP5Q969H6 163 aaKnown RBP10.7□□□□□ -0.7
RTN3-201ENST00000338850 KIAA1191Q96A73 305 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 EME1Q96AY2 570 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 HMCESQ96FZ2 354 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 CDK5RAP1Q96SZ6 601 aaKnown RBP10.7□□□□□ -0.7
RTN3-201ENST00000338850 AARSD1Q9BTE6 412 aaKnown RBP10.7□□□□□ -0.7
RTN3-201ENST00000338850 NMUR1Q9HB89 426 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 PDFQ9HBH1 243 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 NDFIP2Q9NV92 336 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 GID8Q9NWU2 228 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 ADA2Q9NZK5 511 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 ACTR3BQ9P1U1 418 aa10.7□□□□□ -0.7
RTN3-201ENST00000338850 GVINP1Q7Z2Y8 2422 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 SYCE1LA8MT33 242 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 H3BNH8 94 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 H7C4K7 107 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 IFRD1O00458 451 aaPredicted RBP10.69□□□□□ -0.7
RTN3-201ENST00000338850 AURKAO14965 403 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 AZIN1O14977 448 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 VILLO15195 856 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 CFLARO15519 480 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 MSI1O43347 362 aaKnown RBP10.69□□□□□ -0.7
RTN3-201ENST00000338850 RAMP2O60895 175 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 H6PDO95479 791 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 SEC24AO95486 1093 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 NDST3O95803 873 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 RHOP08100 348 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 HNRNPLP14866 589 aaKnown RBP eCLIP10.69□□□□□ -0.72e-12■■■□□ 15.2
RTN3-201ENST00000338850 LBPP18428 481 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 TTKP33981 857 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 GRIK1P39086 918 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 CD86P42081 329 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 ADARP55265 1226 aaKnown RBP10.69□□□□□ -0.7
RTN3-201ENST00000338850 ARPP19P56211 112 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 EEFSECP57772 596 aaKnown RBP10.69□□□□□ -0.7
RTN3-201ENST00000338850 LCP2Q13094 533 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 SMAD1Q15797 465 aaKnown RBP10.69□□□□□ -0.7
RTN3-201ENST00000338850 NADK2Q4G0N4 442 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 PDCD4Q53EL6 469 aaKnown RBP10.69□□□□□ -0.7
RTN3-201ENST00000338850 IL23RQ5VWK5 629 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 DHRS4L2Q6PKH6 230 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 AFTPHQ6ULP2 937 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 SATL1Q86VE3 508 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 FUNDC1Q8IVP5 155 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 TCEAL8Q8IYN2 117 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 MIER2Q8N344 545 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 EFCAB3Q8N7B9 438 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 LEMD2Q8NC56 503 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 ANKRD49Q8WVL7 239 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 ING5Q8WYH8 240 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 USP13Q92995 863 aaPredicted RBP10.69□□□□□ -0.7
RTN3-201ENST00000338850 SLCO4A1Q96BD0 722 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 SPATA17Q96L03 361 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 BIRC8Q96P09 236 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 TRIB3Q96RU7 358 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 NDNQ99608 321 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 MGME1Q9BQP7 344 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 YTHDF1Q9BYJ9 559 aaKnown RBP10.69□□□□□ -0.7
RTN3-201ENST00000338850 BRINP2Q9C0B6 783 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 NT5MQ9NPB1 228 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.69□□□□□ -0.7
RTN3-201ENST00000338850 ATXN10Q9UBB4 475 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms