RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 IQCKQ8N0W5 287 aa13.55□□□□□ -0.24
TUBA1B-202ENST00000336023 RASGEF1AQ8N9B8 481 aa13.55□□□□□ -0.24
TUBA1B-202ENST00000336023 SGF29Q96ES7 293 aa13.55□□□□□ -0.24
TUBA1B-202ENST00000336023 WDR92Q96MX6 357 aa13.55□□□□□ -0.24
TUBA1B-202ENST00000336023 MCMBPQ9BTE3 642 aa13.55□□□□□ -0.24
TUBA1B-202ENST00000336023 P2RY12Q9H244 342 aa13.55□□□□□ -0.24
TUBA1B-202ENST00000336023 GPR27Q9NS67 375 aa13.55□□□□□ -0.24
TUBA1B-202ENST00000336023 FETUBQ9UGM5 382 aa13.55□□□□□ -0.24
TUBA1B-202ENST00000336023 PLAAQ9Y263 795 aa13.55□□□□□ -0.24
TUBA1B-202ENST00000336023 SLC17A4Q9Y2C5 497 aa13.55□□□□□ -0.24
TUBA1B-202ENST00000336023 IKBKGQ9Y6K9 419 aa13.55□□□□□ -0.24
TUBA1B-202ENST00000336023 THADAQ6YHU6 1953 aa13.55□□□□□ -0.24
TUBA1B-202ENST00000336023 FRYLO94915 3013 aa13.55□□□□□ -0.24
TUBA1B-202ENST00000336023 ZNF106Q9H2Y7 1883 aaKnown RBP13.55□□□□□ -0.24
TUBA1B-202ENST00000336023 A0A1B0GTW7 788 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 PRR5-ARHGAP8B1AHC4 643 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 VILLO15195 856 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 GCAP28676 217 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 CTSCP53634 463 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 CSE1LP55060 971 aaKnown RBP13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 GTF2H3Q13889 308 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 PTK2BQ14289 1009 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 CASP8Q14790 479 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 MACC1Q6ZN28 852 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 ZC3HC1Q86WB0 502 aaKnown RBP13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 OR56A4Q8NGH8 313 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 ATXN7L3BQ96GX2 97 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 BIRC8Q96P09 236 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 DHRS4Q9BTZ2 278 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 RHOJQ9H4E5 214 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 FGF22Q9HCT0 170 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 SUSD2Q9UGT4 822 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 RAB23Q9ULC3 237 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 NFS1Q9Y697 457 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 SPAG17Q6Q759 2223 aa13.54□□□□□ -0.24
TUBA1B-202ENST00000336023 SPTY2D1-AS1A0A0U1RR47 76 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 OR2AG2A6NM03 316 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 GPR89AB7ZAQ6 455 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 TNFRSF10CO14798 259 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 SGTAO43765 313 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 NUAK1O60285 661 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 MAGEC1O60732 1142 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 TCEA3O75764 348 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 ESR1P03372 595 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 FUCA1P04066 466 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 IVLP07476 585 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 GPR89BP0CG08 455 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 RPS3P23396 243 aaKnown RBP eCLIP13.53□□□□□ -0.242e-8■■■■□ 23.7
TUBA1B-202ENST00000336023 SPRP35270 261 aaPredicted RBP13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 HOXD12P35452 270 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 FZD2Q14332 565 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 TEAD4Q15561 434 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 CTSL3PQ5NE16 218 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 PEAR1Q5VY43 1037 aaPredicted RBP13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 KCTD16Q68DU8 428 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 PTRHD1Q6GMV3 140 aaKnown RBP13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 ZNF549Q6P9A3 640 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 TMEM220Q6QAJ8 160 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 DCAKDQ8WVC6 231 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 SKA1Q96BD8 255 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 LOXL4Q96JB6 756 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 VPS39Q96JC1 886 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 RBBP8Q99708 897 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 CCDC68Q9H2F9 335 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 MRPL40Q9NQ50 206 aaKnown RBP13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 SLC24A2Q9UI40 661 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 MOSPD1Q9UJG1 213 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 PCDHB1Q9Y5F3 818 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 DNAH14Q0VDD8 3507 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 LAMA1P25391 3075 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 PRSS38A1L453 326 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 SMIM23A6NLE4 172 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 CHUKO15111 745 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 DNAJC6O75061 913 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 AP2A2O94973 939 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 OR56A5P0C7T3 313 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 PKMP14618 531 aaKnown RBP13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 DPP6P42658 865 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 SLCO1A2P46721 670 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 LIMK2P53671 638 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 C21orf59P57076 290 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 ADGRD1Q6QNK2 874 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 HDXQ7Z353 690 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 SPATS2Q86XZ4 545 aaKnown RBP13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 TRAPPC5Q8IUR0 188 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 BEND7Q8N7W2 519 aaPredicted RBP13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 GPATCH11Q8N954 259 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 EPS8L3Q8TE67 593 aaKnown RBP13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 OR1E3Q8WZA6 343 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 ANKRD7Q92527 254 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 TSACCQ96A04 125 aaPredicted RBP13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 PDXPQ96GD0 296 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 SCARF2Q96GP6 870 aaPredicted RBP13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 ZNF514Q96K75 400 aaPredicted RBP13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 ZIM3Q96PE6 472 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 NDNQ99608 321 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 AARSD1Q9BTE6 412 aaKnown RBP13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 RMI1Q9H9A7 625 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 PPCSQ9HAB8 311 aa13.53□□□□□ -0.24
TUBA1B-202ENST00000336023 CYP4F12Q9HCS2 524 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms