RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 SLC6A2P23975 617 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 PRDX3P30048 256 aaKnown RBP16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 ZRANB3Q5FWF4 1079 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 ZNF549Q6P9A3 640 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 OR4K2Q8NGD2 314 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 CDK15Q96Q40 435 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 GPR21Q99679 349 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 PKD2L2Q9NZM6 624 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 GALPQ9UBC7 116 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 NEU3Q9UQ49 428 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 A0A1B0GTL3 188 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 NPEPPSL1A6NEC2 478 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 TEX28O15482 410 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 LDB2O43679 373 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 LDLRP01130 860 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 GSK3BP49841 420 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 BMXP51813 675 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 UFM1P61960 85 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 DNASE1L3Q13609 305 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 CYHR1Q6ZMK1 362 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 CENPNQ96H22 339 aaPredicted RBP16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 DUS2Q9NX74 493 aaKnown RBP16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 ANAPC2Q9UJX6 822 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 ATP11BQ9Y2G3 1177 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 NHSL2Q5HYW2 709 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 C11orf74Q86VG3 221 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 CCDC117Q8IWD4 279 aaPredicted RBP16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 SLC15A4Q8N697 577 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 TFAP2CQ92754 450 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.37■□□□□ 0.211e-11■■■■■ 34
CDC42EP4-201ENST00000335793 PPM1MQ96MI6 270 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 ASB2Q96Q27 587 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 SMIM14Q96QK8 99 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 CXorf21Q9HAI6 301 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 NMRK2Q9NPI5 230 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 SLAMF8Q9P0V8 285 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 RPP40O75818 363 aaKnown RBP16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 IGLV3-25P01717 112 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 ALBP02768 609 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 CYBBP04839 570 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 CLK3P49761 638 aaKnown RBP16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 LCP2Q13094 533 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 SEMA3AQ14563 771 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 ISOC1Q96CN7 298 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 ANKRD60Q9BZ19 345 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 NAA50Q9GZZ1 169 aaKnown RBP16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 EPS8L2Q9H6S3 715 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 RRAGCQ9HB90 399 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 ARNT2Q9HBZ2 717 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 USP22Q9UPT9 525 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 SQORQ9Y6N5 450 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 AQP12BA6NM10 295 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 GNGT2O14610 69 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 MYO1DO94832 1006 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 BMP2P12643 396 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 GALNT1Q10472 559 aaPredicted RBP16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 BNIP2Q12982 314 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 IHHQ14623 411 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 MANEALQ5VSG8 457 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 MSANTD2Q6P1R3 559 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 GLT6D1Q7Z4J2 308 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 AQP12AQ8IXF9 295 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 C2orf69Q8N8R5 385 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 ANKFN1Q8N957 763 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 TNIP2Q8NFZ5 429 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 L3HYPDHQ96EM0 354 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 MTG1Q9BT17 334 aaPredicted RBP16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 ACTR3BQ9P1U1 418 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 PADI4Q9UM07 663 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 TLR6Q9Y2C9 796 aa16.37■□□□□ 0.21
CDC42EP4-201ENST00000335793 CFAP99D6REC4 459 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 SLC22A3O75751 556 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 KCNH1O95259 989 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 CELF2O95319 508 aaKnown RBP16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 ZNF182P17025 639 aaPredicted RBP16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 HTR7P34969 479 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 TRPC1P48995 793 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 MAPK11Q15759 364 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 NIPAL1Q6NVV3 410 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 DCP1BQ8IZD4 617 aaKnown RBP16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 UMODL1-AS1Q8N2C9 162 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 PGBD5Q8N414 524 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 CDKN2AIPNLQ96HQ2 116 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 TUBB1Q9H4B7 451 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 GOLGA8CPA6NN73 597 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 PAPSS2O95340 614 aaPredicted RBP16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 ESRRBO95718 433 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 CHRNB1P11230 501 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 CTBSQ01459 385 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 FRA10AC1Q70Z53 315 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 STK32CQ86UX6 486 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 LGI2Q8N0V4 545 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 TTC9BQ8N6N2 239 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 TRPV3Q8NET8 790 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 OR7D4Q8NG98 312 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 HM13Q8TCT9 377 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 CGREF1Q99674 301 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 WARS2Q9UGM6 360 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms