RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CDKN2AIPNLQ96HQ2 116 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 INTS10Q9NVR2 710 aaKnown RBP14.88□□□□□ -0.03
C9orf47-201ENST00000334490 GRHL1Q9NZI5 618 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 FOXO6A8MYZ6 492 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 PTGESO14684 152 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 ACP5P13686 325 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 DHPSP49366 369 aaPredicted RBP14.88□□□□□ -0.03
C9orf47-201ENST00000334490 ALYREFQ86V81 257 aaKnown RBP14.88□□□□□ -0.03
C9orf47-201ENST00000334490 POMGNT2Q8NAT1 580 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 OVCA2Q8WZ82 227 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 DDX1Q92499 740 aaKnown RBP14.88□□□□□ -0.03
C9orf47-201ENST00000334490 C3orf14Q9HBI5 128 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 CORO2BQ9UQ03 480 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 RBM47A0AV96 593 aaKnown RBP14.88□□□□□ -0.03
C9orf47-201ENST00000334490 CCDC189A1A4V9 331 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 MTX2O75431 263 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 KPNB1Q14974 876 aaKnown RBP14.88□□□□□ -0.03
C9orf47-201ENST00000334490 USP39Q53GS9 565 aaKnown RBP14.88□□□□□ -0.03
C9orf47-201ENST00000334490 ZNF776Q68DI1 518 aaPredicted RBP14.88□□□□□ -0.03
C9orf47-201ENST00000334490 TYW3Q6IPR3 259 aaKnown RBP14.88□□□□□ -0.03
C9orf47-201ENST00000334490 ZNF544Q6NX49 715 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 NRSN1Q8IZ57 195 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 GDPD5Q8WTR4 605 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 HBEGFQ99075 208 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 BTBD1Q9H0C5 482 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 SEMA6AQ9H2E6 1030 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 SRMSQ9H3Y6 488 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 RPS6KA6Q9UK32 745 aa14.88□□□□□ -0.03
C9orf47-201ENST00000334490 BEST1O76090 585 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 TIMP1P01033 207 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 BMPR1AP36894 532 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 LCP2Q13094 533 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 ADHFE1Q8IWW8 467 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 TMEM245Q9H330 911 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 EXO5Q9H790 373 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 KAT6AQ92794 2004 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 MBLAC1A4D2B0 266 aaPredicted RBP14.87□□□□□ -0.03
C9orf47-201ENST00000334490 OR1F1O43749 312 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 ALPPL2P10696 532 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 HLA-EP13747 358 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 DRD4P21917 467 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 SLC34A1Q06495 639 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 C1DQ13901 141 aaKnown RBP14.87□□□□□ -0.03
C9orf47-201ENST00000334490 MINDY4Q4G0A6 757 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 SIRPB2Q5JXA9 342 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 EOGTQ5NDL2 527 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 MED27Q6P2C8 311 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 PRR23BQ6ZRT6 265 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 FSTL5Q8N475 847 aaPredicted RBP14.87□□□□□ -0.03
C9orf47-201ENST00000334490 C19orf60Q96EN9 201 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 FIZ1Q96SL8 496 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 ZNF229Q9UJW7 825 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 MAGEA13PA6NCF6 341 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 GTPBP1O00178 669 aaKnown RBP14.87□□□□□ -0.03
C9orf47-201ENST00000334490 PLIN3O60664 434 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 C8GP07360 202 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 GHRHRQ02643 423 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 FAAH2Q6GMR7 532 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 SULT1C3Q6IMI6 304 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 C22orf39Q6P5X5 142 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 PYDC1Q8WXC3 89 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 BATF3Q9NR55 127 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 ANKRD66B4E2M5 251 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 CDH5P33151 784 aaPredicted RBP14.87□□□□□ -0.03
C9orf47-201ENST00000334490 NRG1Q02297 640 aaPredicted RBP14.87□□□□□ -0.03
C9orf47-201ENST00000334490 PAFAH1B3Q15102 231 aaKnown RBP14.87□□□□□ -0.03
C9orf47-201ENST00000334490 OASLQ15646 514 aaKnown RBP14.87□□□□□ -0.03
C9orf47-201ENST00000334490 CCDC142Q17RM4 750 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 PDE12Q6L8Q7 609 aaKnown RBP14.87□□□□□ -0.03
C9orf47-201ENST00000334490 ZYG11AQ6WRX3 759 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 LUZP2Q86TE4 346 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 FAM20CQ8IXL6 584 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 OTUB2Q96DC9 234 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 KXD1Q9BQD3 176 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 ELOVL2Q9NXB9 296 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 ATP6V1HQ9UI12 483 aa14.87□□□□□ -0.03
C9orf47-201ENST00000334490 LAMB4A4D0S4 1761 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 HNRNPA1P09651 372 aaKnown RBP eCLIP14.86□□□□□ -0.03
C9orf47-201ENST00000334490 GTF2H2Q13888 395 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 CLEC6AQ6EIG7 209 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 GTF2H2CQ6P1K8 395 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 C14orf80Q86SX3 495 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 TWIST2Q8WVJ9 160 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 PIWIL1Q96J94 861 aaKnown RBP14.86□□□□□ -0.03
C9orf47-201ENST00000334490 C9orf16Q9BUW7 83 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 OSBPL6Q9BZF3 934 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 CCDC88AQ3V6T2 1871 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 SETD1AO15047 1707 aaKnown RBP14.86□□□□□ -0.03
C9orf47-201ENST00000334490 RFPL2O75678 378 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 UNC5CO95185 931 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 SLC35G6P0C7Q6 338 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 GALNT2Q10471 571 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 DCAF12L1Q5VU92 463 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 NAPRTQ6XQN6 538 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 EIF2B4Q9UI10 523 aaKnown RBP14.86□□□□□ -0.03
C9orf47-201ENST00000334490 UPK3BL1B0FP48 263 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 UPK3BL2E5RIL1 263 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 CLDN7O95471 211 aa14.86□□□□□ -0.03
C9orf47-201ENST00000334490 DLDP09622 509 aaKnown RBP14.86□□□□□ -0.03
C9orf47-201ENST00000334490 KIR3DL1P43629 444 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms