RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 CTSAP10619 480 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 HGFP14210 728 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 GJA1P17302 382 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 CD70P32970 193 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 MAPK8P45983 427 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 CSNK1DP48730 415 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 AQP4P55087 323 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 NME5P56597 212 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 TGFBIQ15582 683 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 PLEKHG6Q3KR16 790 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 OGFRL1Q5TC84 451 aaPredicted RBP17.22■□□□□ 0.35
DDX28-201ENST00000332395 LAYNQ6UX15 382 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 HACD2Q6Y1H2 254 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 SYVN1Q86TM6 617 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 SERPINA9Q86WD7 417 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 MIER2Q8N344 545 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 GRIN3AQ8TCU5 1115 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 ESAMQ96AP7 390 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 KLHL32Q96NJ5 620 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 TNKS2Q9H2K2 1166 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 ZNF225Q9UK10 706 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 CROTQ9UKG9 612 aa17.22■□□□□ 0.35
DDX28-201ENST00000332395 LAMA2P24043 3122 aaKnown RBP17.21■□□□□ 0.35
DDX28-201ENST00000332395 TRAV19A0A0A6YYK7 116 aa17.21■□□□□ 0.35
DDX28-201ENST00000332395 A0A1W2PRU2 124 aa17.21■□□□□ 0.35
DDX28-201ENST00000332395 PEX1O43933 1283 aa17.21■□□□□ 0.35
DDX28-201ENST00000332395 SOCS5O75159 536 aa17.21■□□□□ 0.35
DDX28-201ENST00000332395 VPS4BO75351 444 aa17.21■□□□□ 0.35
DDX28-201ENST00000332395 ZNF821O75541 412 aaPredicted RBP17.21■□□□□ 0.35
DDX28-201ENST00000332395 ZNF7P17097 686 aaPredicted RBP17.21■□□□□ 0.35
DDX28-201ENST00000332395 TRIM25Q14258 630 aaKnown RBP17.21■□□□□ 0.35
DDX28-201ENST00000332395 RBBP7Q16576 425 aa17.21■□□□□ 0.35
DDX28-201ENST00000332395 GRAMD1BQ3KR37 738 aa17.21■□□□□ 0.35
DDX28-201ENST00000332395 C8orf82Q6P1X6 216 aaPredicted RBP17.21■□□□□ 0.35
DDX28-201ENST00000332395 FIBCD1Q8N539 461 aa17.21■□□□□ 0.35
DDX28-201ENST00000332395 FIBINQ8TAL6 211 aa17.21■□□□□ 0.35
DDX28-201ENST00000332395 PDLIM5Q96HC4 596 aaKnown RBP17.21■□□□□ 0.35
DDX28-201ENST00000332395 NUSAP1Q9BXS6 441 aaKnown RBP17.21■□□□□ 0.35
DDX28-201ENST00000332395 CLPBQ9H078 707 aa17.21■□□□□ 0.35
DDX28-201ENST00000332395 ATP13A3Q9H7F0 1226 aa17.21■□□□□ 0.35
DDX28-201ENST00000332395 ABCB8Q9NUT2 735 aa17.21■□□□□ 0.35
DDX28-201ENST00000332395 EPS15L1Q9UBC2 864 aa17.21■□□□□ 0.35
DDX28-201ENST00000332395 EIF2B4Q9UI10 523 aaKnown RBP17.21■□□□□ 0.35
DDX28-201ENST00000332395 ASB1Q9Y576 335 aa17.21■□□□□ 0.35
DDX28-201ENST00000332395 GOLGA8CPA6NN73 597 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 BBIP1A8MTZ0 92 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 NR5A2O00482 541 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 E2F3O00716 465 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 EFCAB14O75071 495 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 IGSF6O95976 241 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 C8AP07357 584 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 ACRP10323 421 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 CA5AP35218 305 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 HNF1BP35680 557 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 RALGDSQ12967 914 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 NFATC2Q13469 925 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 PTRHD1Q6GMV3 140 aaKnown RBP17.21■□□□□ 0.34
DDX28-201ENST00000332395 SPATA24Q86W54 205 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 OR56A4Q8NGH8 313 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 GBP5Q96PP8 586 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 PLEKHG4BQ96PX9 1271 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 ASB8Q9H765 288 aa17.21■□□□□ 0.34
DDX28-201ENST00000332395 SDR39U1Q9NRG7 319 aaPredicted RBP17.21■□□□□ 0.34
DDX28-201ENST00000332395 INTS6Q9UL03 887 aaKnown RBP17.21■□□□□ 0.34
DDX28-201ENST00000332395 SCN8AQ9UQD0 1980 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 PRORSD1PA6NEY8 169 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 MATN4O95460 622 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 CLDN7O95471 211 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 TIMP1P01033 207 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 UROSP10746 265 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 RPS3P23396 243 aaKnown RBP eCLIP17.2■□□□□ 0.34
DDX28-201ENST00000332395 DYNC1I2Q13409 638 aaKnown RBP17.2■□□□□ 0.34
DDX28-201ENST00000332395 CDKN3Q16667 212 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 DGKKQ5KSL6 1271 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 SNX20Q7Z614 316 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 METTL3Q86U44 580 aaKnown RBP17.2■□□□□ 0.34
DDX28-201ENST00000332395 RETREG3Q86VR2 466 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 HOMEZQ8IX15 550 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 PCYOX1LQ8NBM8 494 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 NAT14Q8WUY8 206 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 ROPN1LQ96C74 230 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 LRGUKQ96M69 825 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 C19orf43Q9BQ61 176 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 BOCQ9BWV1 1114 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 CIPCQ9C0C6 399 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 PCDHAC1Q9H158 963 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 IL26Q9NPH9 171 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 NUDT4Q9NZJ9 180 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 TMEM181Q9P2C4 612 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 RIMS3Q9UJD0 308 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 TSR3Q9UJK0 312 aaKnown RBP17.2■□□□□ 0.34
DDX28-201ENST00000332395 ANKRD12Q6UB98 2062 aa17.2■□□□□ 0.34
DDX28-201ENST00000332395 CAPN8A6NHC0 703 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 LEFTY2O00292 366 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 GIPC1O14908 333 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 CHEK2O96017 543 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 PRR35P0CG20 571 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 IDO1P14902 403 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 ITGALP20701 1170 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 ADGRE1Q14246 886 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms