RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 BEND4Q6ZU67 534 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 RBM18Q96H35 190 aaKnown RBP10.49□□□□□ -0.73
CLN8-201ENST00000331222 SRMSQ9H3Y6 488 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 ACTL7BQ9Y614 415 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 A0A0J9YYE9 177 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 DSC2Q02487 901 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 SMARCB1Q12824 385 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 CAPN13Q6MZZ7 669 aaPredicted RBP10.49□□□□□ -0.73
CLN8-201ENST00000331222 LRRC17Q8N6Y2 441 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 EFHD2Q96C19 240 aaPredicted RBP10.49□□□□□ -0.73
CLN8-201ENST00000331222 HMCESQ96FZ2 354 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 CLPTM1LQ96KA5 538 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 CST11Q9H112 138 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 TBC1D17Q9HA65 648 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 PMF1-BGLAPU3KQ54 211 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 AHCYL1O43865 530 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 ITGA2BP08514 1039 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 MAPTP10636 758 aaKnown RBP10.49□□□□□ -0.73
CLN8-201ENST00000331222 IL12AP29459 219 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 SCN1BQ07699 218 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 NDUFA9Q16795 377 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 UBXN11Q5T124 520 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 BROXQ5VW32 411 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 PAPD7Q5XG87 772 aaKnown RBP10.49□□□□□ -0.73
CLN8-201ENST00000331222 TMEM220Q6QAJ8 160 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 SPATC1Q76KD6 591 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 ANKRD52Q8NB46 1076 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 POF1BQ8WVV4 589 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 BAP1Q92560 729 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 C8orf4Q9NR00 106 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 PCDHB11Q9Y5F2 797 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 PNPLA6Q8IY17 1366 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 KMOO15229 486 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 PCDHGA12O60330 932 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 SLC22A3O75751 556 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 LINGO3P0C6S8 592 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 MYCLP1P12525 358 aaPredicted RBP10.49□□□□□ -0.73
CLN8-201ENST00000331222 LAMP2P13473 410 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 PGAM2P15259 253 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 CLCN7P51798 805 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 TAS2R40P59535 323 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 MRPS5P82675 430 aaKnown RBP10.49□□□□□ -0.73
CLN8-201ENST00000331222 MAPK14Q16539 360 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 COLEC12Q5KU26 742 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 RBM44Q6ZP01 1051 aaKnown RBP10.49□□□□□ -0.73
CLN8-201ENST00000331222 NYAP1Q6ZVC0 841 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 SIDT2Q8NBJ9 832 aaKnown RBP10.49□□□□□ -0.73
CLN8-201ENST00000331222 OR10H4Q8NGA5 316 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 SPATA22Q8NHS9 363 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 HPS1Q92902 700 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 ZFRQ96KR1 1074 aaKnown RBP10.49□□□□□ -0.73
CLN8-201ENST00000331222 TRIM2Q9C040 744 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 CCDC177Q9NQR7 707 aaPredicted RBP10.49□□□□□ -0.73
CLN8-201ENST00000331222 ABCB8Q9NUT2 735 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 ABI3Q9P2A4 366 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 FAM198AQ9UFP1 575 aa10.49□□□□□ -0.73
CLN8-201ENST00000331222 TCRBV5S4A2TA0A5A2 114 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 FAM86C2PA6NEL3 165 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 PSMG1O95456 288 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 KLF1Q13351 362 aaPredicted RBP10.48□□□□□ -0.73
CLN8-201ENST00000331222 DPEP3Q9H4B8 488 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 C12orf4Q9NQ89 552 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 TNS2Q63HR2 1409 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 GRIN2DO15399 1336 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 A0A1W2PPM1 405 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 J3QRK9 145 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 CLDN4O14493 209 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 CCR10P46092 362 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 GLUD2P49448 558 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 CDK7P50613 346 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 LARS2Q15031 903 aaKnown RBP10.48□□□□□ -0.73
CLN8-201ENST00000331222 PPM1JQ5JR12 505 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 C6orf52Q5T4I8 152 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 ZNF398Q8TD17 642 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 OVCA2Q8WZ82 227 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 AZIN2Q96A70 460 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 C12orf66Q96MD2 445 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 SLC39A8Q9C0K1 460 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 TMEM27Q9HBJ8 222 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 DHRS12A0PJE2 317 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 ZSCAN5BA6NJL1 495 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 KRT36O76013 467 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 COL6A1P12109 1028 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 SLC5A3P53794 718 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 ST3GAL1Q11201 340 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 ANXA8L1Q5VT79 327 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 KATNAL2Q8IYT4 538 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 FNIP1Q8TF40 1166 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 ZNF570Q96NI8 536 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 C12orf65Q9H3J6 166 aaKnown RBP10.48□□□□□ -0.73
CLN8-201ENST00000331222 SEC61A2Q9H9S3 476 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 ARL5AQ9Y689 179 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 A0A087WXM4 84 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 A0A1W2PQ72 361 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 CABYRO75952 493 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 ARSIQ5FYB1 569 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 MSANTD1Q6ZTZ1 278 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 ZNF627Q7L945 461 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 ESAMQ96AP7 390 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 CCDC120Q96HB5 630 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms