RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 PRAMEF26H0Y7S4 382 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 NEMP1O14524 444 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 NDUFAB1O14561 156 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 BIRC5O15392 142 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 TSPAN6O43657 245 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 UGT1A9O60656 530 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 SPAG7O75391 227 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 PGLSO95336 258 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 PDHA1P08559 390 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 DHRS4L1P0CG22 281 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 OGNP20774 298 aaKnown RBP16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 SDHBP21912 280 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 CRABP2P29373 138 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 CD151P48509 253 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 EPHB1P54762 984 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 NXPH1P58417 271 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 POU4F1Q01851 419 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 CCDC15Q0P6D6 951 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 TEAD4Q15561 434 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 GLT6D1Q7Z4J2 308 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 CPLX4Q7Z7G2 160 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 TAX1BP1Q86VP1 789 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 ZC3HC1Q86WB0 502 aaKnown RBP16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 MFSD2AQ8NA29 543 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 OR13H1Q8NG92 308 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 OR13J1Q8NGT2 312 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 BLOC1S5Q8TDH9 187 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 HCAR2Q8TDS4 363 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 FUBP1Q96AE4 644 aaKnown RBP16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 RAB7BQ96AH8 199 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 VPS39Q96JC1 886 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 CCT8L2Q96SF2 557 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 ZDHHC5Q9C0B5 715 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 UGT1A7Q9HAW7 530 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 UGT1A10Q9HAW8 530 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 UGT1A8Q9HAW9 530 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 MBNL1Q9NR56 388 aaKnown RBP16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 MID2Q9UJV3 735 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 DMTF1Q9Y222 760 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 BTBD3Q9Y2F9 522 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 PSAT1Q9Y617 370 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 AKAP13Q12802 2813 aa16.31■□□□□ 0.2
PDLIM1-201ENST00000329399 UPK3BL1B0FP48 263 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 UPK3BL2E5RIL1 263 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 H7C0S8 307 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 PIAS1O75925 651 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 KCNK5O95279 499 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 APOA4P06727 396 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 GM2AP17900 193 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 ARNTP27540 789 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 WDR4P57081 412 aaKnown RBP16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 POLR2LP62875 67 aaKnown RBP16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 QPCTQ16769 361 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 ZNF423Q2M1K9 1284 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 CCDC153Q494R4 210 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 TMEM52BQ4KMG9 183 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 PPM1JQ5JR12 505 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 TTC19Q6DKK2 380 aaPredicted RBP16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 LVRNQ6Q4G3 990 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 AFTPHQ6ULP2 937 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 SLC22A18ASQ8N1D0 253 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 LPCAT1Q8NF37 534 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 TSPAN17Q96FV3 270 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 AGAP2Q99490 1192 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 TM7SF3Q9NS93 570 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 INTS10Q9NVR2 710 aaKnown RBP16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 TLK1Q9UKI8 766 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 PHTF1Q9UMS5 762 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 PPIL1Q9Y3C6 166 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 TPRP12270 2363 aaKnown RBP16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 LRRK1Q38SD2 2015 aa16.3■□□□□ 0.2
PDLIM1-201ENST00000329399 KLF11O14901 512 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 AHSGP02765 367 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 ALDOAP04075 364 aaKnown RBP16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 KCNA4P22459 653 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 HNRNPA2B1P22626 353 aaKnown RBP16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 PPARGP37231 505 aaPredicted RBP16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 MMP12P39900 470 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 SLC26A3P40879 764 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 ETV4P43268 484 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 KPNA2P52292 529 aaKnown RBP16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 ZNF140P52738 457 aaPredicted RBP16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 C21orf59P57076 290 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 RALGDSQ12967 914 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 BNIP3Q12983 259 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 GALNT3Q14435 633 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 TAF1BQ53T94 588 aaPredicted RBP16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 RNF187Q5TA31 235 aaPredicted RBP16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 ZNF470Q6ECI4 717 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 KIAA1161Q6NSJ0 714 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 PSAPL1Q6NUJ1 521 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 BRAT1Q6PJG6 821 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 DBX2Q6ZNG2 339 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 CILP2Q8IUL8 1156 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 OR6P1Q8NGX9 317 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 OR4L1Q8NH43 312 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 MGARPQ8TDB4 240 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 LRRC8CQ8TDW0 803 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 PDCD6IPQ8WUM4 868 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms