RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 DEPDC7Q96QD5 511 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 TP63Q9H3D4 680 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 WDCPQ9H6R7 721 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 WDR6Q9NNW5 1121 aaKnown RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF112Q9UJU3 913 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 EIF3LQ9Y262 564 aaKnown RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 BTBD3Q9Y2F9 522 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ABCA3Q99758 1704 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 AGAP5A6NIR3 686 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PTGES3LE9PB15 166 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 C1RP00736 705 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PRR35P0CG20 571 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ITGAMP11215 1152 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 RPL10P27635 214 aaKnown RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PPP3CCP48454 512 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PLK1P53350 603 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ADAM17P78536 824 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 IL5RAQ01344 420 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 KEAP1Q14145 624 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 STARD3Q14849 445 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 NPTX1Q15818 432 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 LRIT3Q3SXY7 679 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 LDLRAP1Q5SW96 308 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 SLC22A17Q8WUG5 538 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 TEPSINQ96N21 525 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CCDC32Q9BV29 185 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CCDC177Q9NQR7 707 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ABCB10Q9NRK6 738 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 TAS2R13Q9NYV9 303 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF219Q9P2Y4 722 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 AKT3Q9Y243 479 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CFL2Q9Y281 166 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 DGKBQ9Y6T7 804 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 TMX2-CTNND1H3BSU7 103 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 KERAO60938 352 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 EPOP01588 193 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 RPS17P08708 135 aaKnown RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 KCNA5P22460 613 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 FDXRP22570 491 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ELK4P28324 431 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 OR4D2P58180 307 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 EMX1Q04741 257 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CPNE9Q8IYJ1 553 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 FATE1Q969F0 183 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 MYDGFQ969H8 173 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 TRAF4Q9BUZ4 470 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 DCSTAMPQ9H295 470 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 TUT1Q9H6E5 874 aaKnown RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 NTN4Q9HB63 628 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 HEBP1Q9NRV9 189 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 WBP11Q9Y2W2 641 aaKnown RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ASB14A6NK59 587 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 HS6ST1O60243 411 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 INMTO95050 263 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 GLP2RO95838 553 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CD1DP15813 335 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 FPR1P21462 350 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 WARSP23381 471 aaKnown RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 DCTP40126 519 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 DIO3P55073 304 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 TEKQ02763 1124 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CAMK2BQ13554 666 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 XKR7Q5GH72 579 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 LIMS2Q7Z4I7 341 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 MCOLN3Q8TDD5 553 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 BLOC1S5Q8TDH9 187 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 DPF3Q92784 378 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CSF3RQ99062 836 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 NUAK2Q9H093 628 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ENOPH1Q9UHY7 261 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 BTRCQ9Y297 605 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 SSC5DA1L4H1 1573 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ZW10O43264 779 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 DFNA5O60443 496 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ERN1O75460 977 aaKnown RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 INSRRP14616 1297 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 IL7RP16871 459 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 HLA-DPA1P20036 260 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CD9P21926 228 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 MTHFRP42898 656 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CTSKP43235 329 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 SUOXP51687 545 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 SLC35A2P78381 396 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 PURAQ00577 322 aaKnown RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 MEP1AQ16819 746 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 C6orf136Q5SQH8 315 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 RBM20Q5T481 1227 aaKnown RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ZBTB46Q86UZ6 589 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 KRT73Q86Y46 540 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CILP2Q8IUL8 1156 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 SLC52A3Q9NQ40 469 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 UBP1Q9NZI7 540 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 LIMD1Q9UGP4 676 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 POU2F3Q9UKI9 436 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 MFHAS1Q9Y4C4 1052 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 LOC100130705A0A1B0GUX0 176 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ELOVL7A1L3X0 281 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 UPK1AO00322 258 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 AURKAO14965 403 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CA12O43570 354 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms