RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 IPMKQ8NFU5 416 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 DTX3LQ8TDB6 740 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 ART4Q93070 314 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 KIAA1143Q96AT1 154 aaPredicted RBP12.52□□□□□ -0.41
CKS2-201ENST00000314355 TADA1Q96BN2 335 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 TIMM29Q9BSF4 260 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 HEMGNQ9BXL5 484 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 PRDM8Q9NQV8 689 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 EFR3BQ9Y2G0 817 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 PCDHGA3Q9Y5H0 932 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 PTPRQQ9UMZ3 2332 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 KIF26BQ2KJY2 2108 aa12.52□□□□□ -0.41
CKS2-201ENST00000314355 WDFY3Q8IZQ1 3526 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 GLYATL1P3A0A0U1RQE8 302 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 GOLGA6L6A8MZA4 724 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 C9orf172C9J069 976 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 CHUKO15111 745 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 CAPN5O15484 640 aaPredicted RBP12.51□□□□□ -0.41
CKS2-201ENST00000314355 NDUFA10O95299 355 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 ITGB2P05107 769 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 PECAM1P16284 738 aaPredicted RBP12.51□□□□□ -0.41
CKS2-201ENST00000314355 MSH3P20585 1137 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 WASHC5Q12768 1159 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 SLC1A5Q15758 541 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 TAZQ16635 292 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 PLA2G4EQ3MJ16 856 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 ZNF648Q5T619 568 aaPredicted RBP12.51□□□□□ -0.41
CKS2-201ENST00000314355 KLHL35Q6PF15 583 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 DARS2Q6PI48 645 aaKnown RBP12.51□□□□□ -0.41
CKS2-201ENST00000314355 BBS12Q6ZW61 710 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 KIAA1328Q86T90 577 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 CDKL3Q8IVW4 592 aaPredicted RBP12.51□□□□□ -0.41
CKS2-201ENST00000314355 SYCE1Q8N0S2 351 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 ZNF567Q8N184 647 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 UBL4BQ8N7F7 174 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 BEND7Q8N7W2 519 aaPredicted RBP12.51□□□□□ -0.41
CKS2-201ENST00000314355 EID2BQ96D98 161 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 MED8Q96G25 268 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 MRFAP1L1Q96HT8 127 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 ZNF514Q96K75 400 aaPredicted RBP12.51□□□□□ -0.41
CKS2-201ENST00000314355 TRIT1Q9H3H1 467 aaKnown RBP12.51□□□□□ -0.41
CKS2-201ENST00000314355 POT1Q9NUX5 634 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 FOXJ2Q9P0K8 574 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 KLHL3Q9UH77 587 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 PCDHA3Q9Y5H8 950 aa12.51□□□□□ -0.41
CKS2-201ENST00000314355 DNMT3AQ9Y6K1 912 aaPredicted RBP12.51□□□□□ -0.41
CKS2-201ENST00000314355 LILRA5A6NI73 299 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.5□□□□□ -0.41
CKS2-201ENST00000314355 POLR1CO15160 346 aaPredicted RBP12.5□□□□□ -0.41
CKS2-201ENST00000314355 UBXN7O94888 489 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 CRTAMO95727 393 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 RALBP11234 206 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 MAP4P27816 1152 aaKnown RBP12.5□□□□□ -0.41
CKS2-201ENST00000314355 RBL1P28749 1068 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 CD68P34810 354 aaPredicted RBP12.5□□□□□ -0.41
CKS2-201ENST00000314355 CTNNA1P35221 906 aaKnown RBP12.5□□□□□ -0.41
CKS2-201ENST00000314355 ZNF75DP51815 510 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 MC2RQ01718 297 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 LY6DQ14210 128 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 SEPT7Q16181 437 aaKnown RBP12.5□□□□□ -0.41
CKS2-201ENST00000314355 LONRF2Q1L5Z9 754 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 ATP13A5Q4VNC0 1218 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 SIRPB2Q5JXA9 342 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 ABRAXAS1Q6UWZ7 409 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 TMEM26Q6ZUK4 368 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 AMZ2Q86W34 360 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 DTX1Q86Y01 620 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 CACNA2D3Q8IZS8 1091 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 TTC13Q8NBP0 860 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 JPH3Q8WXH2 748 aaPredicted RBP12.5□□□□□ -0.41
CKS2-201ENST00000314355 DCUN1D1Q96GG9 259 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 ZDHHC12Q96GR4 267 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 QKIQ96PU8 341 aaKnown RBP eCLIP12.5□□□□□ -0.41
CKS2-201ENST00000314355 OSBPL8Q9BZF1 889 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 FAM117AQ9C073 453 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 UCK1Q9HA47 277 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 FBXO8Q9NRD0 319 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 OCIAD1Q9NX40 245 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 PDP2Q9P2J9 529 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 AMFRQ9UKV5 643 aa12.5□□□□□ -0.41
CKS2-201ENST00000314355 HEMK1Q9Y5R4 338 aaPredicted RBP12.5□□□□□ -0.41
CKS2-201ENST00000314355 KLHL33A6NCF5 533 aa12.49□□□□□ -0.41
CKS2-201ENST00000314355 C5orf60A6NFR6 353 aa12.49□□□□□ -0.41
CKS2-201ENST00000314355 F5H423 210 aaPredicted RBP12.49□□□□□ -0.41
CKS2-201ENST00000314355 AURKAO14965 403 aa12.49□□□□□ -0.41
CKS2-201ENST00000314355 TOX3O15405 576 aaPredicted RBP12.49□□□□□ -0.41
CKS2-201ENST00000314355 MTX2O75431 263 aa12.49□□□□□ -0.41
CKS2-201ENST00000314355 RASSF9O75901 435 aa12.49□□□□□ -0.41
CKS2-201ENST00000314355 EML2O95834 649 aa12.49□□□□□ -0.41
CKS2-201ENST00000314355 RBP3P10745 1247 aa12.49□□□□□ -0.41
CKS2-201ENST00000314355 LPOP22079 712 aaPredicted RBP12.49□□□□□ -0.41
CKS2-201ENST00000314355 RPL10P27635 214 aaKnown RBP12.49□□□□□ -0.41
CKS2-201ENST00000314355 AKT1P31749 480 aa12.49□□□□□ -0.41
CKS2-201ENST00000314355 UGT1A3P35503 534 aa12.49□□□□□ -0.41
CKS2-201ENST00000314355 EIF3EP60228 445 aaKnown RBP12.49□□□□□ -0.41
CKS2-201ENST00000314355 FOXM1Q08050 763 aa12.49□□□□□ -0.41
CKS2-201ENST00000314355 KIF5AQ12840 1032 aa12.49□□□□□ -0.41
CKS2-201ENST00000314355 ZNF449Q6P9G9 518 aa12.49□□□□□ -0.41
CKS2-201ENST00000314355 TMEM220Q6QAJ8 160 aa12.49□□□□□ -0.41
CKS2-201ENST00000314355 KDELC1Q6UW63 502 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms