RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 RBBP7Q16576 425 aa13.34□□□□□ -0.27
CCDC13-201ENST00000310232 TXNDC11Q6PKC3 985 aa13.34□□□□□ -0.27
CCDC13-201ENST00000310232 EXOC2Q96KP1 924 aa13.34□□□□□ -0.27
CCDC13-201ENST00000310232 ALPK1Q96QP1 1244 aa13.34□□□□□ -0.27
CCDC13-201ENST00000310232 RAD21L1Q9H4I0 556 aa13.34□□□□□ -0.27
CCDC13-201ENST00000310232 CD320Q9NPF0 282 aa13.34□□□□□ -0.27
CCDC13-201ENST00000310232 DNMT3BQ9UBC3 853 aaKnown RBP13.34□□□□□ -0.27
CCDC13-201ENST00000310232 PSME2Q9UL46 239 aa13.34□□□□□ -0.27
CCDC13-201ENST00000310232 RNF112Q9ULX5 631 aa13.34□□□□□ -0.27
CCDC13-201ENST00000310232 CPQQ9Y646 472 aa13.34□□□□□ -0.27
CCDC13-201ENST00000310232 KATNA1O75449 491 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 ECI2O75521 394 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 B3GALT4O96024 378 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 F9P00740 461 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 POMCP01189 267 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 THRBP10828 461 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 SLC2A3P11169 496 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 MAP2K4P45985 399 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 TMED10P49755 219 aaKnown RBP13.33□□□□□ -0.27
CCDC13-201ENST00000310232 POLR2JP52435 117 aaKnown RBP13.33□□□□□ -0.27
CCDC13-201ENST00000310232 NKX2-5P52952 324 aaPredicted RBP13.33□□□□□ -0.27
CCDC13-201ENST00000310232 AIF1P55008 147 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 RCAN2Q14206 197 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 PIK3R6Q5UE93 754 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 SPESP1Q6UW49 350 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 GALNT5Q7Z7M9 940 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 SFRP1Q8N474 314 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 Q8N9G6 341 aaPredicted RBP13.33□□□□□ -0.27
CCDC13-201ENST00000310232 PROKR1Q8TCW9 393 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 FKBP10Q96AY3 582 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 NSMCE2Q96MF7 247 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 SARS2Q9NP81 518 aaKnown RBP13.33□□□□□ -0.27
CCDC13-201ENST00000310232 EIF2B4Q9UI10 523 aaKnown RBP13.33□□□□□ -0.27
CCDC13-201ENST00000310232 PNMA8BQ9ULN7 279 aaPredicted RBP13.33□□□□□ -0.27
CCDC13-201ENST00000310232 XIRP2A4UGR9 3374 aa13.33□□□□□ -0.27
CCDC13-201ENST00000310232 PLXNB2O15031 1838 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 IQCF5A8MTL0 148 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 SLC22A3O75751 556 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 PRSS23O95084 383 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 C1QCP02747 245 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 VBP1P61758 197 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 CD47Q08722 323 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 SETMARQ53H47 684 aaPredicted RBP13.33□□□□□ -0.28
CCDC13-201ENST00000310232 BROXQ5VW32 411 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 FBXO39Q8N4B4 442 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 OR10T2Q8NGX3 314 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 MYEOVQ96EZ4 313 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 CDCA5Q96FF9 252 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 TSPAN17Q96FV3 270 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 SMARCD1Q96GM5 515 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 SH3YL1Q96HL8 342 aaPredicted RBP13.33□□□□□ -0.28
CCDC13-201ENST00000310232 KLQ9UEF7 1012 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 HTR3EA5X5Y0 456 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 SOBPA7XYQ1 873 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 CD3EAPO15446 510 aaKnown RBP13.33□□□□□ -0.28
CCDC13-201ENST00000310232 PSMD3O43242 534 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 OR1I1O60431 355 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 DFNA5O60443 496 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 MITFO75030 526 aaPredicted RBP13.33□□□□□ -0.28
CCDC13-201ENST00000310232 ALDH2P05091 517 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 FDXRP22570 491 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 JAK1P23458 1154 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 GJA5P36382 358 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 GPR15P49685 360 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 ATP4BP51164 291 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 GP2P55259 537 aaKnown RBP13.33□□□□□ -0.28
CCDC13-201ENST00000310232 GALNT1Q10472 559 aaPredicted RBP13.33□□□□□ -0.28
CCDC13-201ENST00000310232 SLC14A2Q15849 920 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 FSCN1Q16658 493 aaKnown RBP13.33□□□□□ -0.28
CCDC13-201ENST00000310232 GTDC1Q4AE62 458 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 CCDC81Q6ZN84 652 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 KLHDC8BQ8IXV7 354 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 TBC1D21Q8IYX1 336 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 TRUB1Q8WWH5 349 aaKnown RBP13.33□□□□□ -0.28
CCDC13-201ENST00000310232 MBOAT4Q96T53 435 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 MED16Q9Y2X0 877 aa13.33□□□□□ -0.28
CCDC13-201ENST00000310232 DOCK4Q8N1I0 1966 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 DICER1Q9UPY3 1922 aaKnown RBP13.32□□□□□ -0.28
CCDC13-201ENST00000310232 COL1A2P08123 1366 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 TRIM64BA6NI03 449 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 A6NL46 340 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 BTN3A1O00481 513 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 KCNAB2Q13303 367 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 DAG1Q14118 895 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 ZNF792Q3KQV3 632 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 NIPAL1Q6NVV3 410 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 KIAA0408Q6ZU52 694 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 PHACTR4Q8IZ21 702 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 C10orf111Q8N326 155 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 TMEM199Q8N511 208 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 CHDHQ8NE62 594 aaPredicted RBP13.32□□□□□ -0.28
CCDC13-201ENST00000310232 ITFG1Q8TB96 612 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 BPIFB1Q8TDL5 484 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC13-201ENST00000310232 CCDC97Q96F63 343 aaPredicted RBP13.32□□□□□ -0.28
CCDC13-201ENST00000310232 IMP4Q96G21 291 aaKnown RBP13.32□□□□□ -0.28
CCDC13-201ENST00000310232 CCDC138Q96M89 665 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 BARD1Q99728 777 aaKnown RBP13.32□□□□□ -0.28
CCDC13-201ENST00000310232 ZBED2Q9BTP6 218 aa13.32□□□□□ -0.28
CCDC13-201ENST00000310232 SMOC2Q9H3U7 446 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms