RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 HTRA1Q92743 480 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 B3GALT6Q96L58 329 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 PER2O15055 1255 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 SLC31A1O15431 190 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 PIM1P11309 404 aaPredicted RBP12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 GRK6P43250 576 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 CYP4F8P98187 520 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 RFTN2Q52LD8 501 aaPredicted RBP12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 TPK1Q9H3S4 243 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 FAM227AF5H4B4 570 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 M0R129 80 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 WSCD1Q658N2 575 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 FAM183BPQ6ZVS7 135 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 KCT2Q8NC54 265 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 OR4L1Q8NH43 312 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 RDH11Q8TC12 318 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 HEXDCQ8WVB3 486 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 TRAPPC12Q8WVT3 735 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 AKAP1Q92667 903 aaKnown RBP eCLIP12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 C8orf48Q96LL4 319 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 SEMA3CQ99985 751 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 U3KQV3 271 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 CHD4Q14839 1912 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 SERPINA6P08185 405 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 CDH4P55283 916 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 ADAM8P78325 824 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 ELF3P78545 371 aaPredicted RBP12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 TYSND1Q2T9J0 566 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 TMEM156Q8N614 296 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 TRPS1Q9UHF7 1281 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 USP20Q9Y2K6 914 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 NRCAMQ92823 1304 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 FAM234BA2RU67 622 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 A6NCN8 305 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 CXCL11O14625 94 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 GJB6O95452 261 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 TRUB2O95900 331 aaKnown RBP12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 SLC1A2P43004 574 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 RUNDC3AQ59EK9 446 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 ARCQ7LC44 396 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 SLC29A4Q7RTT9 530 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 TCF12Q99081 682 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 ABCB9Q9NP78 766 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 TBC1D14Q9P2M4 693 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 CLCA3PQ9Y6N3 262 aa12.78□□□□□ -0.36
SPTBN2-201ENST00000309996 ZSCAN5CA6NGD5 496 aaPredicted RBP12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 ZSCAN5DPP0CG00 497 aa12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 IDSP22304 550 aa12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 PSMA1P25786 263 aaKnown RBP12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 S100A2P29034 98 aa12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 SLC8B1Q6J4K2 584 aa12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 TSTD1Q8NFU3 115 aa12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 MGME1Q9BQP7 344 aa12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 ZNF639Q9UID6 485 aa12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 FBXO9Q9UK97 447 aaPredicted RBP12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 CCRL2O00421 344 aa12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 TRBC1P01850 177 aa12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 SLC30A10Q6XR72 485 aa12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 ZNF527Q8NB42 609 aa12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 CLP1Q92989 425 aaKnown RBP12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 GDF3Q9NR23 364 aa12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 NUP50Q9UKX7 468 aa12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 RAP2CQ9Y3L5 183 aa12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 TULP4Q9NRJ4 1543 aa12.77□□□□□ -0.36
SPTBN2-201ENST00000309996 CCDC163A0A0D9SF12 145 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 PLK4O00444 970 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 SLC35G6P0C7Q6 338 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 SCNN1GP51170 649 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 POLNQ7Z5Q5 900 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 ZNF548Q8NEK5 533 aaPredicted RBP12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 GPR152Q8TDT2 470 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 DNAJC28Q9NX36 388 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 ZNF224Q9NZL3 707 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 MBD5Q9P267 1494 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 F8VP50 259 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 H3BQF6 201 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 FPGTO14772 594 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 HOXB6P17509 224 aaKnown RBP12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 PPP3CAQ08209 521 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 TNS4Q8IZW8 715 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 SPATA6LQ8N4H0 392 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 KIAA0895Q8NCT3 520 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 OR5M3Q8NGP4 307 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 R3HDM2Q9Y2K5 976 aaKnown RBP12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 MC4RP32245 332 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 TXNL4AP83876 142 aaKnown RBP12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 ILF3Q12906 894 aaKnown RBP eCLIP12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 ADNP2Q6IQ32 1131 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 OR6K2Q8NGY2 324 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 OR4C6Q8NH72 309 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 NINJ1Q92982 152 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 ALKQ9UM73 1620 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 NTSR2O95665 410 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 ITIH1P19827 911 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 ACTR1AP61163 376 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 HEBP2Q9Y5Z4 205 aa12.77□□□□□ -0.37
SPTBN2-201ENST00000309996 CPS1P31327 1500 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 NT5C1B-RDH14C9J2C7 533 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 TRAFD1O14545 582 aaPredicted RBP12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 DDX3YO15523 660 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms