RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 THADAQ6YHU6 1953 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 DNAH14Q0VDD8 3507 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 A0A1W2PP55 124 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 TSPAN11A1L157 253 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 TTC24A2A3L6 582 aaPredicted RBP8.21□□□□□ -1.1
CHD6-201ENST00000309279 C5orf60A6NFR6 353 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 C16orf96A6NNT2 1141 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 KPNA3O00505 521 aaPredicted RBP8.21□□□□□ -1.1
CHD6-201ENST00000309279 KCNN4O15554 427 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 TTI1O43156 1089 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 SEC22BO75396 215 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 RPP40O75818 363 aaKnown RBP8.21□□□□□ -1.1
CHD6-201ENST00000309279 UGT2B4P06133 528 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 MMP2P08253 660 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 SNRNP70P08621 437 aaKnown RBP8.21□□□□□ -1.1
CHD6-201ENST00000309279 CDH3P22223 829 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 JAK1P23458 1154 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 SERPINA4P29622 427 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 CD6P30203 668 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 CPA2P48052 419 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 BLVRAP53004 296 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 PTPN5P54829 565 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 BCL2L1Q07817 233 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 CNTN1Q12860 1018 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 TUBA3CQ13748 450 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 CYP1B1Q16678 543 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 PIP5KL1Q5T9C9 394 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 AGBL4Q5VU57 503 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 BRAT1Q6PJG6 821 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 SYT10Q6XYQ8 523 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 ZNF600Q6ZNG1 722 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 ERN2Q76MJ5 926 aaKnown RBP8.21□□□□□ -1.1
CHD6-201ENST00000309279 PRPF39Q86UA1 669 aaKnown RBP8.21□□□□□ -1.1
CHD6-201ENST00000309279 CACUL1Q86Y37 369 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 CAMK1DQ8IU85 385 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 HDDC3Q8N4P3 179 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 FRMD1Q8N878 549 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 C12orf50Q8NA57 414 aaPredicted RBP8.21□□□□□ -1.1
CHD6-201ENST00000309279 C1orf54Q8WWF1 131 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 RLN3Q8WXF3 142 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 ATG4AQ8WYN0 398 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 ARRDC3Q96B67 414 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 TUBGCP3Q96CW5 907 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 ZC3H10Q96K80 434 aaKnown RBP8.21□□□□□ -1.1
CHD6-201ENST00000309279 HS6ST2Q96MM7 605 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 TTC25Q96NG3 672 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 KLHL32Q96NJ5 620 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 DACH2Q96NX9 599 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 FCRL5Q96RD9 977 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 TTC1Q99614 292 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 OMDQ99983 421 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 GAL3ST1Q99999 423 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 CEP41Q9BYV8 373 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 PHACTR1Q9C0D0 580 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 SLC25A51Q9H1U9 297 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 SGK2Q9HBY8 427 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 GLOD4Q9HC38 313 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 SEMA3GQ9NS98 782 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 RNF14Q9UBS8 474 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 SERGEFQ9UGK8 458 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 MBD1Q9UIS9 605 aaPredicted RBP8.21□□□□□ -1.1
CHD6-201ENST00000309279 CROTQ9UKG9 612 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 NCKAP1Q9Y2A7 1128 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 DOCK9Q9BZ29 2069 aa8.21□□□□□ -1.1
CHD6-201ENST00000309279 TRPM6Q9BX84 2022 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 A0A1W2PQ67 120 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 L7N2F9 121 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 EBAG9O00559 213 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 PLRG1O43660 514 aaKnown RBP8.2□□□□□ -1.1
CHD6-201ENST00000309279 OPHN1O60890 802 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 GCATO75600 419 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 NEBLO76041 1014 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 PIGNO95427 931 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 SERPINF2P08697 491 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 LTA4HP09960 611 aaKnown RBP8.2□□□□□ -1.1
CHD6-201ENST00000309279 ADRB3P13945 408 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 ACSL1P33121 698 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 CSTF2P33240 577 aaKnown RBP eCLIP8.2□□□□□ -1.14e-10■■■■■ 28.2
CHD6-201ENST00000309279 MSH2P43246 934 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 SUOXP51687 545 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 AFF3P51826 1226 aaKnown RBP8.2□□□□□ -1.1
CHD6-201ENST00000309279 ADPRHP54922 357 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 GDF10P55107 478 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 TAS2R38P59533 333 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 B2MP61769 119 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 POLR2LP62875 67 aaKnown RBP8.2□□□□□ -1.1
CHD6-201ENST00000309279 DSC2Q02487 901 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 GALNT1Q10472 559 aaPredicted RBP8.2□□□□□ -1.1
CHD6-201ENST00000309279 PWP1Q13610 501 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 UGP2Q16851 508 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 P3H1Q32P28 736 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 ANKRD20A2Q5SQ80 823 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 FAM182AQ5T1J6 154 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 ANKRD20A1Q5TYW2 823 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 ANKRD20A3Q5VUR7 823 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 TMEM154Q6P9G4 183 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 ZC3H14Q6PJT7 736 aaKnown RBP8.2□□□□□ -1.1
CHD6-201ENST00000309279 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.2□□□□□ -1.1
CHD6-201ENST00000309279 SLC36A4Q6YBV0 504 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 PARS2Q7L3T8 475 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms