RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 APOL2Q9BQE5 337 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 TIMM29Q9BSF4 260 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 UGT1A7Q9HAW7 530 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 UGT1A10Q9HAW8 530 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 UGT1A8Q9HAW9 530 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 CPNE5Q9HCH3 593 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 SMOXQ9NWM0 555 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 KCNK4Q9NYG8 393 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 FOXJ2Q9P0K8 574 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 ZNF624Q9P2J8 865 aaPredicted RBP19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 KCTD3Q9Y597 815 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 ARL5AQ9Y689 179 aa19.54■□□□□ 0.72
PDZRN3-202ENST00000308537 PRAMEF33A0A0G2JMD5 474 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 C5orf60A6NFR6 353 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 MIF4GDA9UHW6 222 aaKnown RBP19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 HGSO14964 777 aaPredicted RBP19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 EFSO43281 561 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 PRAMEF10O60809 474 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 ANXA9O76027 345 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 CDK14O94921 469 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 ZNF7P17097 686 aaPredicted RBP19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 CTSCP53634 463 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 GDF10P55107 478 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 TMEM115Q12893 351 aaPredicted RBP19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 PLA2G4EQ3MJ16 856 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 PHF19Q5T6S3 580 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 CCDC181Q5TID7 509 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 FAM151BQ6UXP7 276 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 LRRTM4Q86VH4 590 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 DDHD1Q8NEL9 900 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 CMKLR1Q99788 373 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 ARNT2Q9HBZ2 717 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 CPNE7Q9UBL6 633 aa19.53■□□□□ 0.72
PDZRN3-202ENST00000308537 BAHCC1Q9P281 2608 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 KIR2DS5A0A0G2JLQ3 304 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 A0A0G2JNG1 304 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 GLYATL1P3A0A0U1RQE8 302 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 AGAP14A8MT82 685 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 KIR2DS3K7RE56 304 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 KMOO15229 486 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 SNX2O60749 519 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 FGF3P11487 239 aaPredicted RBP19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 XRCC1P18887 633 aaPredicted RBP19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 MPSTP25325 297 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 SLC19A1P41440 591 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 XIAPP98170 497 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 TRA2AQ13595 282 aaKnown RBP eCLIP19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 KIR2DS5Q14953 304 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 TGIF1Q15583 401 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 GPRC6AQ5T6X5 926 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 ZDHHC20Q5W0Z9 365 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 TMEM71Q6P5X7 295 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 DARS2Q6PI48 645 aaKnown RBP19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 ABRAXAS1Q6UWZ7 409 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 MICALCLQ6ZW33 695 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 DTX1Q86Y01 620 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 SYCE1Q8N0S2 351 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 RASGEF1AQ8N9B8 481 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 CCDC97Q96F63 343 aaPredicted RBP19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 FSD1LQ9BXM9 530 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 OGFRQ9NZT2 677 aa19.52■□□□□ 0.72
PDZRN3-202ENST00000308537 OR5K4A6NMS3 321 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 PPFIA2O75334 1257 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 METTL18O95568 372 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 JMJD7P0C870 316 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 CXADRP78310 365 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 SRSF6Q13247 344 aaKnown RBP19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 NFATC2Q13469 925 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 TAF1AQ15573 450 aaPredicted RBP19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 WASH2PQ6VEQ5 465 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 GPR155Q7Z3F1 870 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 ARHGAP22Q7Z5H3 698 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 BMPERQ8N8U9 685 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 USP7Q93009 1102 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 SLC38A3Q99624 504 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 TBC1D10AQ9BXI6 508 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 B3GNT4Q9C0J1 378 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 WASH6PQ9NQA3 447 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 WDR37Q9Y2I8 494 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 AAR2Q9Y312 384 aaKnown RBP19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 COL6A6A6NMZ7 2263 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 PIEZO2Q9H5I5 2752 aa19.51■□□□□ 0.71
PDZRN3-202ENST00000308537 PIKFYVEQ9Y2I7 2098 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 LILRA5A6NI73 299 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 SGTAO43765 313 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 ZNF140P52738 457 aaPredicted RBP19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 EPHA4P54764 986 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 TMPRSS3P57727 454 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 DMPKQ09013 629 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 SPARCL1Q14515 664 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 INSCQ1MX18 579 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 AGAP9Q5VTM2 703 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 WDR74Q6RFH5 385 aaPredicted RBP19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 SLC9B2Q86UD5 537 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 RNF10Q8N5U6 811 aaKnown RBP19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 UBL4BQ8N7F7 174 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 OR4K2Q8NGD2 314 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 BRSK1Q8TDC3 778 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 UBL7Q96S82 380 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms