RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 DEC1Q9P2X7 70 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 NFKBIL1Q9UBC1 381 aaPredicted RBP11.77□□□□□ -0.53
TRIM40-205ENST00000307859 VTI1BQ9UEU0 232 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 ZDHHC2Q9UIJ5 367 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 CRLS1Q9UJA2 301 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 GNPTGQ9UJJ9 305 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 IKZF3Q9UKT9 509 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 DHRS7Q9Y394 339 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 ZFHX2Q9C0A1 2572 aaPredicted RBP11.77□□□□□ -0.53
TRIM40-205ENST00000307859 GOLGA8CPA6NN73 597 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 E5RI56 91 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 GRID2O43424 1007 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 NQO1P15559 274 aaKnown RBP11.76□□□□□ -0.53
TRIM40-205ENST00000307859 TIMP2P16035 220 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 CHRM3P20309 590 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 NFKBIAP25963 317 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 DCDC1P59894 354 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 IL2P60568 153 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 ST8SIA6P61647 398 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 HERVK_113P63132 956 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 ZNF805Q5CZA5 627 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 ZNF678Q5SXM1 525 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 VWA5B1Q5TIE3 1220 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 SEL1L3Q68CR1 1132 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 MACC1Q6ZN28 852 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 NSL1Q96IY1 281 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 CCDC106Q9BWC9 280 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 BOCQ9BWV1 1114 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 ERVK-6Q9BXR3 956 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 MTG2Q9H4K7 406 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 GSTO2Q9H4Y5 243 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 TRIM33Q9UPN9 1127 aa11.76□□□□□ -0.53
TRIM40-205ENST00000307859 IGLV3-16A0A075B6K0 115 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 SYCE1LA8MT33 242 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 UBXN8O00124 270 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 KLK8O60259 260 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 DIAPH2O60879 1101 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 RASSF9O75901 435 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 UGT1A6P19224 532 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 UGT1A1P22309 533 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 UGT1A4P22310 534 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 CALB2P22676 271 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 UGT1A3P35503 534 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 UGT1A5P35504 534 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 RASSF2P50749 326 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 KCNJ2P63252 427 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 RALGDSQ12967 914 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 ARHGEF7Q14155 803 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 UNC50Q53HI1 259 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 LRRC73Q5JTD7 316 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 PTRHD1Q6GMV3 140 aaKnown RBP11.75□□□□□ -0.53
TRIM40-205ENST00000307859 RFLNAQ6ZTI6 216 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 DPPA4Q7L190 304 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 TREML1Q86YW5 311 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 CPNE9Q8IYJ1 553 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 KIRREL3Q8IZU9 778 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 CPA6Q8N4T0 437 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 PTGR2Q8N8N7 351 aaPredicted RBP11.75□□□□□ -0.53
TRIM40-205ENST00000307859 AGR3Q8TD06 166 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 DTX3LQ8TDB6 740 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 FUBP1Q96AE4 644 aaKnown RBP11.75□□□□□ -0.53
TRIM40-205ENST00000307859 ULK4Q96C45 1275 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 PHF21BQ96EK2 531 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 LINGO1Q96FE5 620 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 EML4Q9HC35 981 aaKnown RBP11.75□□□□□ -0.53
TRIM40-205ENST00000307859 SLC40A1Q9NP59 571 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 PCDH12Q9NPG4 1184 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 ZDHHC3Q9NYG2 299 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 PKD2L2Q9NZM6 624 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 ARMCX1Q9P291 453 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 TMCO1Q9UM00 188 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 PRSS21Q9Y6M0 314 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 CACNA1BQ00975 2339 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 NPEPPSL1A6NEC2 478 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 IQCF5A8MTL0 148 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 CDC7O00311 574 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 ECI2O75521 394 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 AOC1P19801 751 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 OPRD1P41143 372 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 ALDH18A1P54886 795 aaKnown RBP11.75□□□□□ -0.53
TRIM40-205ENST00000307859 KDSRQ06136 332 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 ADAM15Q13444 863 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 RUNX3Q13761 415 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 TSNQ15631 228 aaKnown RBP11.75□□□□□ -0.53
TRIM40-205ENST00000307859 HNRNPA1L2Q32P51 320 aaKnown RBP11.75□□□□□ -0.53
TRIM40-205ENST00000307859 SLC9B1Q4ZJI4 515 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 METTL21CQ5VZV1 264 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 RAB44Q7Z6P3 723 aaPredicted RBP11.75□□□□□ -0.53
TRIM40-205ENST00000307859 KIF2BQ8N4N8 673 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 TERB1Q8NA31 727 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 LKAAEAR1Q8TD35 194 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 EEF1AKMT1Q8WVE0 214 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 EXT2Q93063 718 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 FAR2Q96K12 515 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 MYADMQ96S97 322 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 SMOXQ9NWM0 555 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 RNF112Q9ULX5 631 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 PLA2G4CQ9UP65 541 aa11.75□□□□□ -0.53
TRIM40-205ENST00000307859 C5orf42Q9H799 3197 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 EDDM13A0A1B0GTR0 161 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms