RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 MOCOSQ96EN8 888 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 CNDP2Q96KP4 475 aaKnown RBP12.55□□□□□ -0.4
USP38-201ENST00000307017 RIPOR3Q96MK2 946 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 DENND2DQ9H6A0 471 aaPredicted RBP12.55□□□□□ -0.4
USP38-201ENST00000307017 TVP23BQ9NYZ1 205 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 ITSN1Q15811 1721 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 HECW2Q9P2P5 1572 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 HACD1B0YJ81 288 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 LDB2O43679 373 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 ITM2AO43736 263 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 SNAP91O60641 907 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 ERN1O75460 977 aaKnown RBP12.55□□□□□ -0.4
USP38-201ENST00000307017 NOL4O94818 638 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 OPN1SWP03999 348 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 NOS2P35228 1153 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 GABRB2P47870 512 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 IDH3AP50213 366 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 MTA1Q13330 715 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 DUPD1Q68J44 220 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 RAB43Q86YS6 212 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 RP9Q8TA86 221 aaKnown RBP12.55□□□□□ -0.4
USP38-201ENST00000307017 SNX33Q8WV41 574 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 HERC2P3Q9BVR0 1158 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 ZNF358Q9NW07 568 aa12.55□□□□□ -0.4
USP38-201ENST00000307017 THG1LQ9NWX6 298 aaKnown RBP12.55□□□□□ -0.4
USP38-201ENST00000307017 FARSAQ9Y285 508 aaKnown RBP12.55□□□□□ -0.4
USP38-201ENST00000307017 BMP10O95393 424 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 FABP3P05413 133 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 SMIM10L2AP0DMW4 78 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 SMIM10L2BP0DMW5 78 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 DDR1Q08345 913 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 KLF10Q13118 480 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 SLC8B1Q6J4K2 584 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 ANKRD26P1Q6NSI1 321 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 OR8S1Q8NH09 359 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 DLG3Q92796 817 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 C5orf34Q96MH7 638 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 GPR21Q99679 349 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 EIF2B4Q9UI10 523 aaKnown RBP12.54□□□□□ -0.4
USP38-201ENST00000307017 MED31Q9Y3C7 131 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 MYH10P35580 1976 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 QSOX1O00391 747 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 CDK7P50613 346 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 TLR1Q15399 786 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 MFSD3Q96ES6 412 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 EBNA1BP2Q99848 306 aaKnown RBP12.54□□□□□ -0.4
USP38-201ENST00000307017 CCDC28BQ9BUN5 200 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 RACGAP1Q9H0H5 632 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 RIOX1Q9H6W3 641 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 SALL4Q9UJQ4 1053 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 ARHGEF5Q12774 1597 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 C2orf92A0A1B0GVN3 265 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 MAGEB3O15480 346 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 IPO13O94829 963 aaKnown RBP12.54□□□□□ -0.4
USP38-201ENST00000307017 ANGPTL1O95841 491 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 MAGEA2P43356 314 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 CHRNA4P43681 627 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 ARHGDIBP52566 201 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 PIGFQ07326 219 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 RGS1Q08116 209 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 CPTPQ5TA50 214 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 ZNF611Q8N823 705 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 PGM2Q96G03 612 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 Q96MT0 163 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 AGO3Q9H9G7 860 aaKnown RBP12.54□□□□□ -0.4
USP38-201ENST00000307017 AGO1Q9UL18 857 aaKnown RBP12.54□□□□□ -0.4
USP38-201ENST00000307017 CORO1CQ9ULV4 474 aaPredicted RBP12.54□□□□□ -0.4
USP38-201ENST00000307017 TMEM233B4DJY2 109 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 MLYCDO95822 493 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 PGRP06401 933 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 TUBG1P23258 451 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 DNASE1L1P49184 302 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 NUDT6P53370 316 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 LIPEQ05469 1076 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 E2F2Q14209 437 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 IL23RQ5VWK5 629 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 FAM9CQ8IZT9 166 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 GALNT15Q8N3T1 639 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 PRKD2Q9BZL6 878 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 LMAN2LQ9H0V9 348 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 NKX1-2Q9UD57 310 aaPredicted RBP12.54□□□□□ -0.4
USP38-201ENST00000307017 RPH3AQ9Y2J0 694 aaPredicted RBP12.54□□□□□ -0.4
USP38-201ENST00000307017 PXDNLA1KZ92 1463 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 M0R036 132 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 ALOX5P09917 674 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 SSR2P43308 183 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 ARCN1P48444 511 aaKnown RBP12.54□□□□□ -0.4
USP38-201ENST00000307017 OAFQ86UD1 273 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 SLC22A8Q8TCC7 542 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 DOK4Q8TEW6 326 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 HAS1Q92839 578 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 MTIF3Q9H2K0 278 aaKnown RBP12.54□□□□□ -0.4
USP38-201ENST00000307017 PNPLA8Q9NP80 782 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 FKBP7Q9Y680 259 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 CCDC163A0A0D9SF12 145 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 PIP5K1BO14986 540 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 RGS10O43665 173 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 PLIN3O60664 434 aa12.54□□□□□ -0.4
USP38-201ENST00000307017 RSL1D1O76021 490 aaKnown RBP12.54□□□□□ -0.4
USP38-201ENST00000307017 FNTBP49356 437 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms