RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 BFARQ9NZS9 450 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 CENPFP49454 3210 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 H0Y858 1186 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 PRKCHP24723 683 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 DCKP27707 260 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 L1CAMP32004 1257 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 RPS9P46781 194 aaKnown RBP10.83□□□□□ -0.68
LSM3-201ENST00000306024 TUBB3Q13509 450 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 CAMK2BQ13554 666 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 FUT11Q495W5 492 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 UGT3A1Q6NUS8 523 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 ELMOD2Q8IZ81 293 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 ATPAF2Q8N5M1 289 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 ELMO1Q92556 727 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 MOCOSQ96EN8 888 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 FCRL2Q96LA5 508 aaPredicted RBP10.83□□□□□ -0.68
LSM3-201ENST00000306024 CLSTN3Q9BQT9 956 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 MROQ9BYG7 248 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 SLC2A11Q9BYW1 496 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 CDH7Q9ULB5 785 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 RUVBL2Q9Y230 463 aaKnown RBP10.83□□□□□ -0.68
LSM3-201ENST00000306024 SYNCRIPO60506 623 aaKnown RBP10.82□□□□□ -0.68
LSM3-201ENST00000306024 IL12AP29459 219 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 RPS3AP61247 264 aaKnown RBP10.82□□□□□ -0.68
LSM3-201ENST00000306024 RAP1GAP2Q684P5 730 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 PPP4R4Q6NUP7 873 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 CD300LGQ6UXG3 332 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 PLEKHG7Q6ZR37 379 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 MAVSQ7Z434 540 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 PHOSPHO2Q8TCD6 241 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 PROX1Q92786 737 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 PABPC5Q96DU9 382 aaKnown RBP10.82□□□□□ -0.68
LSM3-201ENST00000306024 SH3YL1Q96HL8 342 aaPredicted RBP10.82□□□□□ -0.68
LSM3-201ENST00000306024 NPY6RQ99463 290 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 SLC25A23Q9BV35 468 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 ACE2Q9BYF1 805 aaPredicted RBP10.82□□□□□ -0.68
LSM3-201ENST00000306024 CAB39LQ9H9S4 337 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 CYP4F12Q9HCS2 524 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 SCML2Q9UQR0 700 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 INSL5Q9Y5Q6 135 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 SNX10Q9Y5X0 201 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 TRIOBPQ9H2D6 2365 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 PAGE1O75459 146 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 SNRPB2P08579 225 aaKnown RBP10.82□□□□□ -0.68
LSM3-201ENST00000306024 CTSAP10619 480 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 MYOGP15173 224 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 ERCC2P18074 760 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 SMAD3P84022 425 aaKnown RBP10.82□□□□□ -0.68
LSM3-201ENST00000306024 ILF2Q12905 390 aaKnown RBP10.82□□□□□ -0.68
LSM3-201ENST00000306024 E2F2Q14209 437 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 KCNJ11Q14654 390 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 OXA1LQ15070 435 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 BNIPLQ7Z465 357 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 C8orf59Q8N0T1 100 aaPredicted RBP10.82□□□□□ -0.68
LSM3-201ENST00000306024 ASCC1Q8N9N2 400 aaKnown RBP10.82□□□□□ -0.68
LSM3-201ENST00000306024 PNPT1Q8TCS8 783 aaKnown RBP10.82□□□□□ -0.68
LSM3-201ENST00000306024 TFAP2CQ92754 450 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 RNF145Q96MT1 663 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 SLC39A3Q9BRY0 314 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 ZNF670Q9BS34 389 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 NMUR1Q9HB89 426 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 TMPRSS4Q9NRS4 437 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 SUCOQ9UBS9 1254 aaKnown RBP10.82□□□□□ -0.68
LSM3-201ENST00000306024 PNMA8BQ9ULN7 279 aaPredicted RBP10.82□□□□□ -0.68
LSM3-201ENST00000306024 PCP4L1A6NKN8 68 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 EVPLLA8MZ36 301 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 TSPAN3O60637 253 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 KRT6AP02538 564 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 KRT6BP04259 564 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 APOA4P06727 396 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 NOMO1Q15155 1222 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 EXT2Q93063 718 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 SORT1Q99523 831 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 CCSER2Q9H7U1 834 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 CD320Q9NPF0 282 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 TMEM30AQ9NV96 361 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 MKS1Q9NXB0 559 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 TRAF6Q9Y4K3 522 aa10.82□□□□□ -0.68
LSM3-201ENST00000306024 LCHNA4D1U4 455 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 CENPBD1B2RD01 187 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 IRAK2O43187 625 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 BNIP3LO60238 219 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 SLC25A11Q02978 314 aaKnown RBP10.81□□□□□ -0.68
LSM3-201ENST00000306024 FCHO2Q0JRZ9 810 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 SHHQ15465 462 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 INSCQ1MX18 579 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 BRMS1LQ5PSV4 323 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 AGAP7PQ5VUJ5 663 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 SLC8B1Q6J4K2 584 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 TTC23LQ6PF05 361 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 RSPO2Q6UXX9 243 aaPredicted RBP10.81□□□□□ -0.68
LSM3-201ENST00000306024 KIAA0408Q6ZU52 694 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 GET4Q7L5D6 327 aaPredicted RBP10.81□□□□□ -0.68
LSM3-201ENST00000306024 ERMP1Q7Z2K6 904 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 DENND1CQ8IV53 801 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 LGI2Q8N0V4 545 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 CENPNQ96H22 339 aaPredicted RBP10.81□□□□□ -0.68
LSM3-201ENST00000306024 CSPG4P5Q96PW8 444 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 PEBP4Q96S96 227 aa10.81□□□□□ -0.68
LSM3-201ENST00000306024 KCTD15Q96SI1 283 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms