RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ZNF781Q8N8C0 355 aa15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 PPM1EQ8WY54 764 aa15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 EXT2Q93063 718 aa15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 SCAMP4Q969E2 229 aa15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 RAB7BQ96AH8 199 aa15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 PHF21BQ96EK2 531 aa15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 ATOH8Q96SQ7 321 aa15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 HDAC8Q9BY41 377 aa15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 ACTR5Q9H9F9 607 aaPredicted RBP15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 EML4Q9HC35 981 aaKnown RBP15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 FBRSL1Q9HCM7 1045 aaKnown RBP15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 SPATS2LQ9NUQ6 558 aaKnown RBP15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 PNPOQ9NVS9 261 aa15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 HCN2Q9UL51 889 aa15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 TMCO1Q9UM00 188 aa15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 PRSS21Q9Y6M0 314 aa15.54■□□□□ 0.08
HERPUD1-201ENST00000300302 NEMP1O14524 444 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 TSPAN12O95859 305 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 KCNA5P22460 613 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 DGKAP23743 735 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 AKT1P31749 480 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 PSMD8P48556 350 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 RPL14P50914 215 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 METAP1P53582 386 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 HERVK_113P63132 956 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 AAK1Q2M2I8 961 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 TTLL9Q3SXZ7 439 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 GPRC6AQ5T6X5 926 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 ERP27Q96DN0 273 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 L3HYPDHQ96EM0 354 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 CCDC97Q96F63 343 aaPredicted RBP15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 TMEM237Q96Q45 408 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 CDX2Q99626 313 aaPredicted RBP15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 WRAP53Q9BUR4 548 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 RIOK2Q9BVS4 552 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 ERVK-6Q9BXR3 956 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 ZDHHC4Q9NPG8 344 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 KLHL42Q9P2K6 505 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 ZFP69BQ9UJL9 534 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 ITM2BQ9Y287 266 aa15.53■□□□□ 0.08
HERPUD1-201ENST00000300302 TICRRQ7Z2Z1 1910 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 SUPT3HB4E1H0 165 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 SLCO1B7G3V0H7 640 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 AREL1O15033 823 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 SYNCRIPO60506 623 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 SUPT3HO75486 399 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 UBOX5O94941 541 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 CHRNGP07510 517 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 GFAPP14136 432 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 ATP1B2P14415 290 aaPredicted RBP15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 ALOX15P16050 662 aaPredicted RBP15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 SKIV2LQ15477 1246 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 TSNQ15631 228 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 SPDYAQ5MJ70 313 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 ATG14Q6ZNE5 492 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 CYP2U1Q7Z449 544 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 MTDHQ86UE4 582 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 KIRREL3Q8IZU9 778 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 ZBTB2Q8N680 514 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 AP2M1Q96CW1 435 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 RILPQ96NA2 401 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 VPS35Q96QK1 796 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 TRMOQ9BU70 441 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 TRPV5Q9NQA5 729 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 LATS2Q9NRM7 1088 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 DNAJC28Q9NX36 388 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 HAO1Q9UJM8 370 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 PLXNA2O75051 1894 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 PLXNB3Q9ULL4 1909 aa15.52■□□□□ 0.08
HERPUD1-201ENST00000300302 NPEPPSL1A6NEC2 478 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 GRXCR2A6NFK2 248 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 SPECC1L-ADORA2AF8WAN1 911 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 K7EQS6 105 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 UBXN8O00124 270 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 CDC7O00311 574 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 ITGB6P18564 788 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 SERPINB3P29508 390 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 CTHP32929 405 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 B4GALNT1Q00973 533 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 CAMK2GQ13555 558 aaPredicted RBP15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 GALNTL6Q49A17 601 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 LDLRAP1Q5SW96 308 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 ZNF678Q5SXM1 525 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 SDE2Q6IQ49 451 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 MYO1HQ8N1T3 1032 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 FUBP1Q96AE4 644 aaKnown RBP15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 SKA1Q96BD8 255 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 DTD2Q96FN9 168 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 COQ10AQ96MF6 247 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 MYLK2Q9H1R3 596 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 ABCG8Q9H221 673 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 KCTD5Q9NXV2 234 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 VTI1BQ9UEU0 232 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 TMPRSS11EQ9UL52 423 aa15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 APOBEC2Q9Y235 224 aaKnown RBP15.52■□□□□ 0.07
HERPUD1-201ENST00000300302 SPINT1O43278 529 aa15.51■□□□□ 0.07
HERPUD1-201ENST00000300302 MTHFD2P13995 350 aa15.51■□□□□ 0.07
HERPUD1-201ENST00000300302 MSH3P20585 1137 aa15.51■□□□□ 0.07
HERPUD1-201ENST00000300302 MPSTP25325 297 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms