RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 ZSCAN5AQ9BUG6 496 aa9.66□□□□□ -0.86
CCDC58-201ENST00000291458 ASCL3Q9NQ33 180 aa9.66□□□□□ -0.86
CCDC58-201ENST00000291458 LZTFL1Q9NQ48 299 aa9.66□□□□□ -0.86
CCDC58-201ENST00000291458 PRDM8Q9NQV8 689 aa9.66□□□□□ -0.86
CCDC58-201ENST00000291458 THSD1Q9NS62 852 aa9.66□□□□□ -0.86
CCDC58-201ENST00000291458 PIH1D1Q9NWS0 290 aaKnown RBP9.66□□□□□ -0.86
CCDC58-201ENST00000291458 TMEM9Q9P0T7 183 aa9.66□□□□□ -0.86
CCDC58-201ENST00000291458 VPS18Q9P253 973 aa9.66□□□□□ -0.86
CCDC58-201ENST00000291458 TBC1D29Q9UFV1 150 aa9.66□□□□□ -0.86
CCDC58-201ENST00000291458 KLHL3Q9UH77 587 aa9.66□□□□□ -0.86
CCDC58-201ENST00000291458 PKP3Q9Y446 797 aa9.66□□□□□ -0.86
CCDC58-201ENST00000291458 KCTD3Q9Y597 815 aa9.66□□□□□ -0.86
CCDC58-201ENST00000291458 ARL5AQ9Y689 179 aa9.66□□□□□ -0.86
CCDC58-201ENST00000291458 PKD1L2Q7Z442 2459 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 LOC285095A0A1B0GVY8 99 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 PLD2O14939 933 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 PPM1DO15297 605 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 KLK10O43240 276 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 B4GAT1O43505 415 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 NUAK1O60285 661 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 UGT1A9O60656 530 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 UGT1A6P19224 532 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 HLA-DPA1P20036 260 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 UGT1A1P22309 533 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 UGT1A4P22310 534 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 CA5AP35218 305 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 PTPN7P35236 360 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 UGT1A3P35503 534 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 UGT1A5P35504 534 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 ETV5P41161 510 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 GDF10P55107 478 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 CXADRP78310 365 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 B4GALNT1Q00973 533 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 HHEXQ03014 270 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 LRP8Q14114 963 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 KCTD19Q17RG1 926 aaPredicted RBP9.65□□□□□ -0.86
CCDC58-201ENST00000291458 LRRTM4Q86VH4 590 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 CACTIN-AS1Q8N1I8 211 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 JPH3Q8WXH2 748 aaPredicted RBP9.65□□□□□ -0.86
CCDC58-201ENST00000291458 SCARF2Q96GP6 870 aaPredicted RBP9.65□□□□□ -0.86
CCDC58-201ENST00000291458 SPATA13Q96N96 652 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 FCRL3Q96P31 734 aaPredicted RBP9.65□□□□□ -0.86
CCDC58-201ENST00000291458 SLC38A3Q99624 504 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 TBL1YQ9BQ87 522 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 OCSTAMPQ9BR26 566 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 TMEM121Q9BTD3 319 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 UGT1A7Q9HAW7 530 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 UGT1A10Q9HAW8 530 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 UGT1A8Q9HAW9 530 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 RAD18Q9NS91 495 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 APPL1Q9UKG1 709 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 TRHDEQ9UKU6 1024 aa9.65□□□□□ -0.86
CCDC58-201ENST00000291458 A0A087WV48 116 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 GLYATL1P3A0A0U1RQE8 302 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 RGSL1A5PLK6 1076 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 OR2AG2A6NM03 316 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 A8MU76 341 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 MIF4GDA9UHW6 222 aaKnown RBP9.64□□□□□ -0.87
CCDC58-201ENST00000291458 STX7O15400 261 aaKnown RBP9.64□□□□□ -0.87
CCDC58-201ENST00000291458 ANXA9O76027 345 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 CDK14O94921 469 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 RPL10P27635 214 aaKnown RBP9.64□□□□□ -0.87
CCDC58-201ENST00000291458 DRG2P55039 364 aaKnown RBP9.64□□□□□ -0.87
CCDC58-201ENST00000291458 GSDMDP57764 484 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 SNX1Q13596 522 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 C16orf72Q14CZ0 275 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 PRUNE1Q86TP1 453 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 PIM3Q86V86 326 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 FAM129CQ86XR2 697 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 TRIM48Q8IWZ4 208 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 LSMEM2Q8N112 164 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 ZNF248Q8NDW4 579 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 OR4K2Q8NGD2 314 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 OR13C4Q8NGS5 318 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 CCDC97Q96F63 343 aaPredicted RBP9.64□□□□□ -0.87
CCDC58-201ENST00000291458 LIN37Q96GY3 246 aaPredicted RBP9.64□□□□□ -0.87
CCDC58-201ENST00000291458 PRR11Q96HE9 360 aaPredicted RBP9.64□□□□□ -0.87
CCDC58-201ENST00000291458 CALR3Q96L12 384 aaKnown RBP9.64□□□□□ -0.87
CCDC58-201ENST00000291458 ZNF578Q96N58 590 aaPredicted RBP9.64□□□□□ -0.87
CCDC58-201ENST00000291458 TTC25Q96NG3 672 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 PLEKHG4BQ96PX9 1271 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 TBC1D10AQ9BXI6 508 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 TSGA10Q9BZW7 698 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 CARD9Q9H257 536 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 FAM96AQ9H5X1 160 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 STN1Q9H668 368 aaKnown RBP9.64□□□□□ -0.87
CCDC58-201ENST00000291458 CPNE5Q9HCH3 593 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 IL26Q9NPH9 171 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 HACD3Q9P035 362 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 SLC23A2Q9UGH3 650 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 TMPRSS11EQ9UL52 423 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 MAP4K5Q9Y4K4 846 aa9.64□□□□□ -0.87
CCDC58-201ENST00000291458 IGHV1OR21-1A0A087WYE8 117 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 PRAMEF33A0A0G2JMD5 474 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 KRT86O43790 486 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 DUX1O43812 170 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 PRAMEF10O60809 474 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 PRAMEF1O95521 474 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 CPNE6O95741 557 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 IFNB1P01574 187 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms