RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 A0A1W2PQ45 241 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 A0A1W2PQY0 241 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TULP3O75386 442 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 MC4RP32245 332 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 GRIA3P42263 894 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 GXYLT1Q4G148 440 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ABCA11PQ4W5N1 156 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PLPP4Q5VZY2 271 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 AAGABQ6PD74 315 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PLET1Q6UQ28 207 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CAND1Q86VP6 1230 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 C12orf40Q86WS4 652 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TMEM17Q86X19 198 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SIX5Q8N196 739 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 FBXO30Q8TB52 745 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 STK32AQ8WU08 396 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TMEM125Q96AQ2 219 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ZBED6CLQ96FA7 236 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 APOLD1Q96LR9 279 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 INPP4AQ96PE3 977 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 HEPHQ9BQS7 1158 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 GLOD4Q9HC38 313 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 BCL9O00512 1426 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 MYO10Q9HD67 2058 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CNOT1A5YKK6 2376 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CACNA1EQ15878 2313 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 HYKKA2RU49 373 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TP53I11O14683 189 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PAGE1O75459 146 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PRAMEF1O95521 474 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 HMGN1P05114 100 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 S100A6P06703 90 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PKMP14618 531 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 GJA1P17302 382 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 STOMP27105 288 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 NSG1P42857 185 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 GABRB2P47870 512 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 POU5F1Q01860 360 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SLC13A2Q13183 592 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 DPYSQ14117 519 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 RALGPS1Q5JS13 557 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SNAP47Q5SQN1 464 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 FNBP1LQ5T0N5 605 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 HECTD2Q5U5R9 776 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 NET1Q7Z628 596 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SYVN1Q86TM6 617 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TDRPQ86YL5 185 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CLVS1Q8IUQ0 354 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 BHLHE22Q8NFJ8 381 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TNFAIP8L1Q8WVP5 186 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 DNAJA4Q8WW22 397 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 NINJ1Q92982 152 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CAPNS2Q96L46 248 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 HOPXQ9BPY8 73 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 GSDMCQ9BYG8 508 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TBL1XR1Q9BZK7 514 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 GRIP2Q9C0E4 1043 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 STRADBQ9C0K7 418 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 LHX5Q9H2C1 402 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 DHRS7Q9Y394 339 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 B4GALT4O60513 344 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CLDN9O95484 217 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ZNF823P16415 610 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 IL12AP29459 219 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PTGER3P43115 390 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ZNF132P52740 706 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CRISP3P54108 245 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CASP9P55211 416 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ACTR1AP61163 376 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 MKRN4PQ13434 485 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 RFTN1Q14699 578 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PDCD4Q53EL6 469 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ALKBH2Q6NS38 261 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ASB18Q6ZVZ8 466 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 UBE2R2Q712K3 238 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 GET4Q7L5D6 327 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SLC26A9Q7LBE3 791 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ZER1Q7Z7L7 766 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ALLCQ8N6M5 410 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TMEM145Q8NBT3 493 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TMEM161BQ8NDZ6 487 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ZMIZ2Q8NF64 920 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CNDP2Q96KP4 475 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SNRNP25Q9BV90 132 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 LACRTQ9GZZ8 138 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SEMA4AQ9H3S1 761 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PTGES2Q9H7Z7 377 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SP140LQ9H930 580 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 OSGEPQ9NPF4 335 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SLC2A4RGQ9NR83 387 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SMCO3A2RU48 225 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 FAM25EA8MYX2 175 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 IRAK2O43187 625 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SNAPC5O75971 98 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ERCC1P07992 297 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 COX4I1P13073 169 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TNFRSF8P28908 595 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SLC1A2P43004 574 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 GRIA4P48058 902 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TAF10Q12962 218 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms