RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ZNF670Q9BS34 389 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 B3GNT4Q9C0J1 378 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 LACRTQ9GZZ8 138 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 TREM1Q9NP99 234 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ELOVL2Q9NXB9 296 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 PDPK1O15530 556 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 IFI30P13284 250 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 LHCGRP22888 699 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 CCKBRP32239 447 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 TIE1P35590 1138 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 KCNJ2P63252 427 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 SLC10A7Q0GE19 358 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 BST1Q10588 318 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 CDKAL1Q5VV42 579 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 SV2AQ7L0J3 742 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 PARGQ86W56 976 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 GPR65Q8IYL9 337 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 NELFAQ9H3P2 528 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 MRPL17Q9NRX2 175 aaKnown RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 SNTG2Q9NY99 539 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 PCDHGB7Q9Y5F8 929 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 KNTC1P50748 2209 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 GSC2O15499 205 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 IFNA2P01563 188 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ETS2P15036 469 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 SLC6A4P31645 630 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 PHC1P78364 1004 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 CERCAMQ5T4B2 595 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 FAM151BQ6UXP7 276 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ART5Q96L15 291 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 PGLYRP2Q96PD5 576 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 FANCFQ9NPI8 374 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 PHPT1Q9NRX4 125 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 TNFRSF11BO00300 401 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ANGPTL1O95841 491 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 EPHA3P29320 983 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 TMBIM6P55061 237 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 IDNKQ5T6J7 187 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 C3orf67Q6ZVT6 689 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 CUZD1Q86UP6 607 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 VANGL1Q8TAA9 524 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-201ENST00000282516 CEP295NLQ96MC4 621 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 ACSS3Q9H6R3 686 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 UNC13BO14795 1591 aa8.67□□□□□ -1.02
NIPBL-201ENST00000282516 MYH7BA7E2Y1 1941 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 H3BRB1 525 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 USP12O75317 370 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 NME6O75414 186 aaPredicted RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 RENP00797 406 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 ERBB2P04626 1255 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 CLCN7P51798 805 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 BACE1P56817 501 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 CSTF1Q05048 431 aaKnown RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 C9orf64Q5T6V5 341 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 FAM35AQ86V20 835 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 CAND1Q86VP6 1230 aaKnown RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 SLC38A4Q969I6 547 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 SLC7A6OSQ96CW6 309 aaPredicted RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 MYO19Q96H55 970 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 PFDN5Q99471 154 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 TUT1Q9H6E5 874 aaKnown RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 SPON1Q9HCB6 807 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 ABCD2Q9UBJ2 740 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 CXCR3P49682 368 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 GDI2P50395 445 aaKnown RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF132P52740 706 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 MAMLD1Q13495 774 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 OR4L1Q8NH43 312 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 PRAMEF12O95522 483 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 RPS2P15880 293 aaKnown RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 AFF1P51825 1210 aaKnown RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 CPSF6Q16630 551 aaKnown RBP eCLIP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 CRTC2Q53ET0 693 aaPredicted RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 CEP68Q76N32 757 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 FDXACB1Q9BRP7 624 aaPredicted RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 TBC1D17Q9HA65 648 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 GDAP2Q9NXN4 497 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 BDNFP23560 247 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 RIOX2Q8IUF8 465 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF565Q8N9K5 539 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 LSM14AQ8ND56 463 aaKnown RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 TMEM161BQ8NDZ6 487 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 OTUB2Q96DC9 234 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF570Q96NI8 536 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 PCBD2Q9H0N5 130 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 ASF1AQ9Y294 204 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 RBMX2Q9Y388 322 aaKnown RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 DHX15O43143 795 aaKnown RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 AQP1P29972 269 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 AP2S1P53680 142 aaPredicted RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 POM121L1PQ3SYA9 428 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 UNC93AQ86WB7 457 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 JSRP1Q96MG2 331 aaPredicted RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 ERVK-5Q9HDB9 667 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 CFL2Q9Y281 166 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 ROBO2Q9HCK4 1378 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 ILVBLA1L0T0 632 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 SCELO95171 688 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 TRUB2O95900 331 aaKnown RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 ACVR2AP27037 513 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms