RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 TBX21Q9UL17 535 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 CRYL1Q9Y2S2 319 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 PCDHGA11Q9Y5H2 935 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 UBXN8O00124 270 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 HLA-DQB2P05538 268 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 CLTBP09497 229 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 FSHRP23945 695 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 PCYT1AP49585 367 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 GPNMBQ14956 572 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 RPS6KA2Q15349 733 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 BROXQ5VW32 411 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 LRRC8DQ7L1W4 858 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 LINC00523Q86TU6 105 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 SFRP1Q8N474 314 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 LRRC52Q8N7C0 313 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 APPL2Q8NEU8 664 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 UBXN10Q96LJ8 280 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 CTRCQ99895 268 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 SMURF2Q9HAU4 748 aa11.26□□□□□ -0.61
SCLT1-201ENST00000281142 MARCH4Q9P2E8 410 aaPredicted RBP11.26□□□□□ -0.61
SCLT1-201ENST00000281142 CCDC85CA6NKD9 419 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 BBIP1A8MTZ0 92 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 UPK1AO00322 258 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 PITPNM1O00562 1244 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 NCAM2O15394 837 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 NOBOXO60393 691 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 INMTO95050 263 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 GPIP06744 558 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 ITGB8P26012 769 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 ATP4BP51164 291 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 KPNA2P52292 529 aaKnown RBP11.25□□□□□ -0.61
SCLT1-201ENST00000281142 ARPC4P59998 168 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 MAPK11Q15759 364 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 CTU2Q2VPK5 515 aaKnown RBP11.25□□□□□ -0.61
SCLT1-201ENST00000281142 INAVAQ3KP66 663 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 HABP4Q5JVS0 413 aaKnown RBP11.25□□□□□ -0.61
SCLT1-201ENST00000281142 CRTC3Q6UUV7 619 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 CATSPER4Q7RTX7 472 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 COLGALT2Q8IYK4 626 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 RAB2BQ8WUD1 216 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 SCLYQ96I15 445 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 IL12RB2Q99665 862 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 TUBA1CQ9BQE3 449 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 COLEC11Q9BWP8 271 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 MROQ9BYG7 248 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 GLOD4Q9HC38 313 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 INTS10Q9NVR2 710 aaKnown RBP11.25□□□□□ -0.61
SCLT1-201ENST00000281142 POLR3BQ9NW08 1133 aaPredicted RBP11.25□□□□□ -0.61
SCLT1-201ENST00000281142 PCDHGA8Q9Y5G5 932 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 TET1Q8NFU7 2136 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 ABCB7O75027 752 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 SELPP16109 830 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 CRHBPP24387 322 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 CD52P31358 61 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 CYP2C18P33260 490 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 PIGAP37287 484 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 ARSDP51689 593 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 ARSFP54793 590 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 UFM1P61960 85 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 CLCQ05315 142 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 LAPTM5Q13571 262 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 PFKFB4Q16877 469 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 ARL13BQ3SXY8 428 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 STK32CQ86UX6 486 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 CLYBLQ8N0X4 340 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 FAM86B1Q8N7N1 296 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 GABPB2Q8TAK5 448 aaPredicted RBP11.25□□□□□ -0.61
SCLT1-201ENST00000281142 TMBIM1Q969X1 311 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 TRIM43Q96BQ3 446 aaPredicted RBP11.25□□□□□ -0.61
SCLT1-201ENST00000281142 MRGPRX2Q96LB1 330 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 CCDC138Q96M89 665 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 FSD1LQ9BXM9 530 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 GPN2Q9H9Y4 310 aaPredicted RBP11.25□□□□□ -0.61
SCLT1-201ENST00000281142 TMEM39AQ9NV64 488 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 KLQ9UEF7 1012 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 KLHL3Q9UH77 587 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 UTS2RQ9UKP6 389 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 ST3GAL5Q9UNP4 418 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 B3GNT3Q9Y2A9 372 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 KCTD3Q9Y597 815 aa11.25□□□□□ -0.61
SCLT1-201ENST00000281142 PIRO00625 290 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 MTSS1O43312 755 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 NBNO60934 754 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 CNTN5O94779 1100 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 RBP1P09455 135 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 JUNBP17275 347 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 DNAJB1P25685 340 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 ADRA1AP35348 466 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 ZFP36L2P47974 494 aaKnown RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 CCL23P55773 120 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 DAOAP59103 153 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 SELPLGQ14242 412 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 PTPRCAPQ14761 206 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 AAK1Q2M2I8 961 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 TIGD2Q4W5G0 525 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 WSCD1Q658N2 575 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 BLOC1S3Q6QNY0 202 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 UTS2BQ765I0 119 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 ARHGAP12Q8IWW6 846 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 CLEC4FQ8N1N0 589 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms