RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 METTL21CQ5VZV1 264 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 CRTC1Q6UUV9 634 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 SERPINA9Q86WD7 417 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 PLPP6Q8IY26 295 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 SLC44A3Q8N4M1 653 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 OR2A12Q8NGT7 310 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 AGAP11Q8TF27 550 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 STON2Q8WXE9 905 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 SUV39H2Q9H5I1 410 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 DENND2DQ9H6A0 471 aaPredicted RBP20.75■□□□□ 0.91
YBX3-202ENST00000279550 TRMT6Q9UJA5 497 aaKnown RBP20.75■□□□□ 0.91
YBX3-202ENST00000279550 CDYLQ9Y232 598 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 PFDN6O15212 129 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 KERAO60938 352 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 WFS1O76024 890 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 PYGLP06737 847 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 TPBGLP0DKB5 382 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 UGT1A6P19224 532 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 CD9P21926 228 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 UGT1A1P22309 533 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 UGT1A4P22310 534 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 UGT1A3P35503 534 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 UGT1A5P35504 534 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 CPOXP36551 454 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 GRIA2P42262 883 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 HERVK_113P63132 956 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 CHRNA6Q15825 494 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 TMEM198Q66K66 360 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 TUBGCP5Q96RT8 1024 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 CCDC28BQ9BUN5 200 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 BOCQ9BWV1 1114 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 ERVK-6Q9BXR3 956 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 ZNF385DQ9H6B1 395 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 TRPV5Q9NQA5 729 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 SUPT7LO94864 414 aa20.74■□□□□ 0.91
YBX3-202ENST00000279550 SNUPNO95149 360 aaKnown RBP20.74■□□□□ 0.91
YBX3-202ENST00000279550 POP4O95707 220 aaKnown RBP20.74■□□□□ 0.91
YBX3-202ENST00000279550 ESR1P03372 595 aa20.74■□□□□ 0.91
YBX3-202ENST00000279550 UGT2B4P06133 528 aa20.74■□□□□ 0.91
YBX3-202ENST00000279550 ADARP55265 1226 aaKnown RBP20.74■□□□□ 0.91
YBX3-202ENST00000279550 ATP6V0D1P61421 351 aa20.74■□□□□ 0.91
YBX3-202ENST00000279550 BTKQ06187 659 aa20.74■□□□□ 0.91
YBX3-202ENST00000279550 PFKFB4Q16877 469 aa20.74■□□□□ 0.91
YBX3-202ENST00000279550 PTCRAQ6ISU1 281 aaPredicted RBP20.74■□□□□ 0.91
YBX3-202ENST00000279550 ACAD11Q709F0 780 aa20.74■□□□□ 0.91
YBX3-202ENST00000279550 TMPRSS6Q8IU80 811 aa20.74■□□□□ 0.91
YBX3-202ENST00000279550 CPNE9Q8IYJ1 553 aa20.74■□□□□ 0.91
YBX3-202ENST00000279550 NKAPQ8N5F7 415 aaKnown RBP20.74■□□□□ 0.91
YBX3-202ENST00000279550 EEF1AKMT1Q8WVE0 214 aa20.74■□□□□ 0.91
YBX3-202ENST00000279550 LINGO1Q96FE5 620 aa20.74■□□□□ 0.91
YBX3-202ENST00000279550 CPEB1Q9BZB8 566 aaKnown RBP20.74■□□□□ 0.91
YBX3-202ENST00000279550 SARS2Q9NP81 518 aaKnown RBP20.74■□□□□ 0.91
YBX3-202ENST00000279550 RNF112Q9ULX5 631 aa20.74■□□□□ 0.91
YBX3-202ENST00000279550 PRSS21Q9Y6M0 314 aa20.74■□□□□ 0.91
YBX3-202ENST00000279550 TICRRQ7Z2Z1 1910 aa20.74■□□□□ 0.91
YBX3-202ENST00000279550 TRBV5-4A0A0C4DH59 114 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 CCDC189A1A4V9 331 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 SUPT3HB4E1H0 165 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 SUPT3HO75486 399 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 SKAP2O75563 359 aaPredicted RBP20.73■□□□□ 0.91
YBX3-202ENST00000279550 APODP05090 189 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 CHRM3P20309 590 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 PGM1P36871 562 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 RECQLP46063 649 aaPredicted RBP20.73■□□□□ 0.91
YBX3-202ENST00000279550 CLCN7P51798 805 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 CDH13P55290 713 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 LRRC73Q5JTD7 316 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 RFLNAQ6ZTI6 216 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 NUDT18Q6ZVK8 323 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 STK40Q8N2I9 435 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 LKAAEAR1Q8TD35 194 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 UCMAQ8WVF2 138 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 KCNJ9Q92806 393 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.73■□□□□ 0.91
YBX3-202ENST00000279550 MCUR1Q96AQ8 359 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 MAELQ96JY0 434 aaKnown RBP20.73■□□□□ 0.91
YBX3-202ENST00000279550 MARK4Q96L34 752 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 CATSPER2Q96P56 530 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 LYSMD1Q96S90 227 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 ASB8Q9H765 288 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 EML4Q9HC35 981 aaKnown RBP20.73■□□□□ 0.91
YBX3-202ENST00000279550 FBRSL1Q9HCM7 1045 aaKnown RBP20.73■□□□□ 0.91
YBX3-202ENST00000279550 WASH3PC4AMC7 463 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 BTN3A1O00481 513 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 PPP6CO00743 305 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 PRMT5O14744 637 aaPredicted RBP20.73■□□□□ 0.91
YBX3-202ENST00000279550 PEX11AO75192 247 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 ASGR2P07307 311 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 LHCGRP22888 699 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 GALNT1Q10472 559 aaPredicted RBP20.73■□□□□ 0.91
YBX3-202ENST00000279550 NFATC2Q13469 925 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 ZNF234Q14588 700 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 FNDC3BQ53EP0 1204 aaKnown RBP20.73■□□□□ 0.91
YBX3-202ENST00000279550 WASHC2DQ5SRD0 308 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 NXNQ6DKJ4 435 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 SNX20Q7Z614 316 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 ZNF366Q8N895 744 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 GPR26Q8NDV2 337 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 STAG3L4Q8TBR4 150 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 FUBP1Q96AE4 644 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms