RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CYB5D2Q8WUJ1 264 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 OSCP1Q8WVF1 389 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 SORCS1Q8WY21 1168 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 MARK4Q96L34 752 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 HTATIP2Q9BUP3 242 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 LATS2Q9NRM7 1088 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 ZDHHC3Q9NYG2 299 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 CD274Q9NZQ7 290 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 B4GALT6Q9UBX8 382 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 SLC7A8Q9UHI5 535 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 NCF1BA6NI72 391 aaPredicted RBP9.48□□□□□ -0.89
TRIM55-201ENST00000276573 NCF1CA8MVU1 366 aaPredicted RBP9.48□□□□□ -0.89
TRIM55-201ENST00000276573 UBDO15205 165 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 CIB2O75838 187 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 TRIM16O95361 564 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 PAPLNO95428 1278 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 ANP32DO95626 131 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 C1SP09871 688 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 NCF1P14598 390 aaPredicted RBP9.48□□□□□ -0.89
TRIM55-201ENST00000276573 ITGB6P18564 788 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 DGKAP23743 735 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 VIPR2P41587 438 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 SPINT3P49223 89 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 DGKGP49619 791 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 AGTR2P50052 363 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 LCP2Q13094 533 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 TGFBIQ15582 683 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 PPP1R3AQ16821 1122 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 EML3Q32P44 896 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 ARSIQ5FYB1 569 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 GPRC6AQ5T6X5 926 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 KANK2Q63ZY3 851 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 BRAT1Q6PJG6 821 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 TMC5Q6UXY8 1006 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 DEFB107AQ8IZN7 70 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 LKAAEAR1Q8TD35 194 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 ZNF483Q8TF39 744 aaPredicted RBP9.48□□□□□ -0.89
TRIM55-201ENST00000276573 NAT14Q8WUY8 206 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 PBXIP1Q96AQ6 731 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 C3orf30Q96M34 536 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 PLEKHG4BQ96PX9 1271 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 MRGBPQ9NV56 204 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 SLC8A2Q9UPR5 921 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 DNAJC15Q9Y5T4 150 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 WASF2Q9Y6W5 498 aa9.48□□□□□ -0.89
TRIM55-201ENST00000276573 AIM2O14862 343 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 HOXC11O43248 304 aaPredicted RBP9.47□□□□□ -0.89
TRIM55-201ENST00000276573 CCNT2O60583 730 aaKnown RBP9.47□□□□□ -0.89
TRIM55-201ENST00000276573 SNX2O60749 519 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 LEFTY1O75610 366 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 PSMG1O95456 288 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 ASLP04424 464 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 SRPRAP08240 638 aaKnown RBP9.47□□□□□ -0.89
TRIM55-201ENST00000276573 ADH5P11766 374 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 TIMP2P16035 220 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 GNAZP19086 355 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 NSG1P42857 185 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 RGS4P49798 205 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 FOXA1P55317 472 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 DUSP6Q16828 381 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 ATP13A5Q4VNC0 1218 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 FBXO48Q5FWF7 155 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 WLSQ5T9L3 541 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 C6orf163Q5TEZ5 329 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 FAM219BQ5XKK7 198 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 TRIM68Q6AZZ1 485 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 KYQ8NBH2 561 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 CFAP61Q8NHU2 1237 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 WFIKKN2Q8TEU8 576 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 C19orf60Q96EN9 201 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 PANX3Q96QZ0 392 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 HGH1Q9BTY7 390 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 CERS4Q9HA82 394 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 EBF2Q9HAK2 575 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 SEMA4BQ9NPR2 832 aaPredicted RBP9.47□□□□□ -0.89
TRIM55-201ENST00000276573 NUDT4Q9NZJ9 180 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 NOP53Q9NZM5 478 aaKnown RBP9.47□□□□□ -0.89
TRIM55-201ENST00000276573 KLHL42Q9P2K6 505 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 PCTPQ9UKL6 214 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 YBX2Q9Y2T7 364 aaKnown RBP9.47□□□□□ -0.89
TRIM55-201ENST00000276573 SCN8AQ9UQD0 1980 aa9.47□□□□□ -0.89
TRIM55-201ENST00000276573 ZNF106Q9H2Y7 1883 aaKnown RBP9.46□□□□□ -0.89
TRIM55-201ENST00000276573 IGLV3-16A0A075B6K0 115 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 A0A1B0GTL3 188 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 TSPAN11A1L157 253 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 H0Y3Z8 333 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 MLYCDO95822 493 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 CYP2A6P11509 494 aaPredicted RBP9.46□□□□□ -0.89
TRIM55-201ENST00000276573 ARSAP15289 507 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 ZNF30P17039 623 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 VIPR1P32241 457 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 NRIP1P48552 1158 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 ATP4BP51164 291 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 ACTR3P61158 418 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 ARHGEF7Q14155 803 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 SQLEQ14534 574 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 SHHQ15465 462 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 ZRSR2Q15696 482 aaKnown RBP9.46□□□□□ -0.89
TRIM55-201ENST00000276573 TRMT5Q32P41 509 aaKnown RBP9.46□□□□□ -0.89
TRIM55-201ENST00000276573 LRRC73Q5JTD7 316 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms