RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 OR2T34Q8NGX1 318 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 OR2T3Q8NH03 318 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 CDC26Q8NHZ8 85 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 KIAA1191Q96A73 305 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 EFHD1Q9BUP0 239 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 ASB8Q9H765 288 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 TMEM181Q9P2C4 612 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 SUN2Q9UH99 717 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 TRPM7Q96QT4 1865 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 SZT2Q5T011 3432 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 KANSL1LA0AUZ9 987 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 PYGLP06737 847 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 ZNF140P52738 457 aaPredicted RBP16.46■□□□□ 0.23
VPS54-201ENST00000272322 ERVPABLB-1P60509 514 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 DLG3Q92796 817 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 L3HYPDHQ96EM0 354 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 ANGPTL3Q9Y5C1 460 aa16.46■□□□□ 0.23
VPS54-201ENST00000272322 FXYD1O00168 92 aa16.46■□□□□ 0.22
VPS54-201ENST00000272322 ARPC2O15144 300 aa16.46■□□□□ 0.22
VPS54-201ENST00000272322 KERAO60938 352 aa16.46■□□□□ 0.22
VPS54-201ENST00000272322 TNFAIP8O95379 198 aa16.46■□□□□ 0.22
VPS54-201ENST00000272322 CHEK2O96017 543 aa16.46■□□□□ 0.22
VPS54-201ENST00000272322 G6PDP11413 515 aa16.46■□□□□ 0.22
VPS54-201ENST00000272322 SELPP16109 830 aa16.46■□□□□ 0.22
VPS54-201ENST00000272322 ZNF23P17027 643 aa16.46■□□□□ 0.22
VPS54-201ENST00000272322 IL12AP29459 219 aa16.46■□□□□ 0.22
VPS54-201ENST00000272322 ADSLP30566 484 aaPredicted RBP16.46■□□□□ 0.22
VPS54-201ENST00000272322 RPL5P46777 297 aaKnown RBP16.46■□□□□ 0.22
VPS54-201ENST00000272322 CYP4F8P98187 520 aa16.46■□□□□ 0.22
VPS54-201ENST00000272322 TGFBIQ15582 683 aa16.46■□□□□ 0.22
VPS54-201ENST00000272322 AP1ARQ63HQ0 302 aa16.46■□□□□ 0.22
VPS54-201ENST00000272322 LKAAEAR1Q8TD35 194 aa16.46■□□□□ 0.22
VPS54-201ENST00000272322 TRIB3Q96RU7 358 aa16.46■□□□□ 0.22
VPS54-201ENST00000272322 KCTD14Q9BQ13 255 aaPredicted RBP16.46■□□□□ 0.22
VPS54-201ENST00000272322 SUCOQ9UBS9 1254 aaKnown RBP16.46■□□□□ 0.22
VPS54-201ENST00000272322 PKP3Q9Y446 797 aa16.46■□□□□ 0.22
VPS54-201ENST00000272322 POLR3HQ9Y535 204 aaPredicted RBP16.46■□□□□ 0.22
VPS54-201ENST00000272322 CLGNO14967 610 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 GSNP06396 782 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 SLC2A4P14672 509 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 CSKP41240 450 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 MAPKAPK2P49137 400 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 GSK3BP49841 420 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 ZXDBP98169 803 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 AFTPHQ6ULP2 937 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 MARVELD2Q8N4S9 558 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 TSPAN14Q8NG11 270 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 PYCR2Q96C36 320 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 MGME1Q9BQP7 344 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 TRMOQ9BU70 441 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 FAM192AQ9GZU8 254 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 MAGEH1Q9H213 219 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 NLE1Q9NVX2 485 aaPredicted RBP16.45■□□□□ 0.22
VPS54-201ENST00000272322 CD84Q9UIB8 345 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 ZNF236Q9UL36 1845 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 EI24O14681 340 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 B3GALT4O96024 378 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 SELPLGQ14242 412 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 GPRIN3Q6ZVF9 776 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 CCDC117Q8IWD4 279 aaPredicted RBP16.45■□□□□ 0.22
VPS54-201ENST00000272322 CMTR2Q8IYT2 770 aaKnown RBP16.45■□□□□ 0.22
VPS54-201ENST00000272322 CD200R1Q8TD46 325 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 ALG2Q9H553 416 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 CD300AQ9UGN4 299 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 PRSS21Q9Y6M0 314 aa16.45■□□□□ 0.22
VPS54-201ENST00000272322 SLC22A3O75751 556 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 PRAMEF1O95521 474 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 CKMP06732 381 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 EFNA1P20827 205 aaPredicted RBP16.44■□□□□ 0.22
VPS54-201ENST00000272322 WEE1P30291 646 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 CDH4P55283 916 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 BIRC2Q13490 618 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 IRF5Q13568 498 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 LAPTM5Q13571 262 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 ARHGEF7Q14155 803 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 RFTN2Q52LD8 501 aaPredicted RBP16.44■□□□□ 0.22
VPS54-201ENST00000272322 SH3GL3Q99963 347 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 MYOFQ9NZM1 2061 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.44■□□□□ 0.22
VPS54-201ENST00000272322 TMX2-CTNND1H3BSU7 103 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 HTRA2O43464 458 aaPredicted RBP16.44■□□□□ 0.22
VPS54-201ENST00000272322 B4GAT1O43505 415 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 SLC7A1P30825 629 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 MAGEA11P43364 429 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 STK19P49842 368 aaPredicted RBP16.44■□□□□ 0.22
VPS54-201ENST00000272322 INHBCP55103 352 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 RPL38P63173 70 aaKnown RBP16.44■□□□□ 0.22
VPS54-201ENST00000272322 RFTN1Q14699 578 aaPredicted RBP16.44■□□□□ 0.22
VPS54-201ENST00000272322 CPSF6Q16630 551 aaKnown RBP eCLIP16.44■□□□□ 0.22
VPS54-201ENST00000272322 ANKS3Q6ZW76 656 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 TSPAN33Q86UF1 283 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 ANKRD46Q86W74 232 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 ADGRG2Q8IZP9 1017 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 TFB2MQ9H5Q4 396 aaKnown RBP16.44■□□□□ 0.22
VPS54-201ENST00000272322 KLQ9UEF7 1012 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 DOCK4Q8N1I0 1966 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 CASP8AP2Q9UKL3 1982 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 LCHNA4D1U4 455 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 H3BNC9 293 aa16.44■□□□□ 0.22
VPS54-201ENST00000272322 VILLO15195 856 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms