RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 PGAM2P15259 253 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 RBL1P28749 1068 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 GCNT6Q5T4J0 391 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 OR2T12Q8NG77 320 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 FERD3LQ96RJ6 166 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 TTC3P53804 2025 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 A0A087X0B3 334 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 SSX4O60224 188 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 CTDNEP1O95476 244 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 TRUB2O95900 331 aaKnown RBP12.01□□□□□ -0.49
SRRM4-201ENST00000267260 ZNF782Q6ZMW2 699 aaPredicted RBP12.01□□□□□ -0.49
SRRM4-201ENST00000267260 SLC2A14Q8TDB8 520 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 BAP1Q92560 729 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 ITFG2Q969R8 447 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 CALML5Q9NZT1 146 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 TRAF6Q9Y4K3 522 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 TP73O15350 636 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 LINGO3P0C6S8 592 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 PRDX6P30041 224 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 PPP4CP60510 307 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 SYCE2Q6PIF2 218 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 MCEMP1Q8IX19 187 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 OR4L1Q8NH43 312 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 RHBDF1Q96CC6 855 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 TIFAQ96CG3 184 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 LINGO1Q96FE5 620 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 CLPTM1LQ96KA5 538 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 LACRTQ9GZZ8 138 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 DEFB129Q9H1M3 183 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 EGFL7Q9UHF1 273 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 PCDHB1Q9Y5F3 818 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 PCDHGB2Q9Y5G2 931 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 NWD1Q149M9 1564 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 CLCA1A8K7I4 914 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 STMND1H3BQB6 276 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 H3BRB1 525 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 ASGR1P07306 291 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 TACSTD2P09758 323 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 OR3A3P47888 321 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 OR3A2P47893 321 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 PNLIPRP1P54315 467 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 ADAM32Q8TC27 787 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 TUT1Q9H6E5 874 aaKnown RBP12.01□□□□□ -0.49
SRRM4-201ENST00000267260 DNAAF2Q9NVR5 837 aaKnown RBP12.01□□□□□ -0.49
SRRM4-201ENST00000267260 PRKAB1Q9Y478 270 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 TRPV2Q9Y5S1 764 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 TLL2Q9Y6L7 1015 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 PIGBOS1A0A0B4J2F0 54 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 ELOVL7A1L3X0 281 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 H0Y858 1186 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 PER2O15055 1255 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 C16orf46Q6P387 395 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 ZNF700Q9H0M5 742 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 TBCCD1Q9NVR7 557 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 TMED5Q9Y3A6 229 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 RBM47A0AV96 593 aaKnown RBP12.01□□□□□ -0.49
SRRM4-201ENST00000267260 GADD45AP24522 165 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 NDUFA9Q16795 377 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 WSCD2Q2TBF2 565 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 ZNF517Q6ZMY9 492 aaPredicted RBP12.01□□□□□ -0.49
SRRM4-201ENST00000267260 C16orf58Q96GQ5 468 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 SGK2Q9HBY8 427 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 COPS7AQ9UBW8 275 aa12.01□□□□□ -0.49
SRRM4-201ENST00000267260 CACNB4O00305 520 aaPredicted RBP12□□□□□ -0.49
SRRM4-201ENST00000267260 LAMP2P13473 410 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 CRHR1P34998 444 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 ZNF311Q5JNZ3 666 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 PHYKPLQ8IUZ5 450 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 GHDCQ8N2G8 530 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 CPSF7Q8N684 471 aaKnown RBP12□□□□□ -0.49
SRRM4-201ENST00000267260 TMEM39BQ9GZU3 492 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 PIH1D1Q9NWS0 290 aaKnown RBP12□□□□□ -0.49
SRRM4-201ENST00000267260 ABCD2Q9UBJ2 740 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 DPPA5A6NC42 116 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 BTBD19C9JJ37 291 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 PDLIM1O00151 329 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 LIASO43766 372 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 FGF19O95750 216 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 DDX6P26196 483 aaKnown RBP eCLIP12□□□□□ -0.49
SRRM4-201ENST00000267260 PPP3CAQ08209 521 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 IDNKQ5T6J7 187 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 IQSEC1Q6DN90 963 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 CES5AQ6NT32 575 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 TCEAL3Q969E4 200 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 MAB21L2Q9Y586 359 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 ARL5AQ9Y689 179 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 DCLK1O15075 740 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 CABYRO75952 493 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 NUDT17P0C025 328 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 SLC5A3P53794 718 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 CD300LFQ8TDQ1 290 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 MTMR8Q96EF0 704 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 ZNF717Q9BY31 904 aaPredicted RBP12□□□□□ -0.49
SRRM4-201ENST00000267260 LRRC19Q9H756 370 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 SCN2BO60939 215 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 RPS9P46781 194 aaKnown RBP12□□□□□ -0.49
SRRM4-201ENST00000267260 SLC9B1Q4ZJI4 515 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 USP30Q70CQ3 517 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 GPR65Q8IYL9 337 aa12□□□□□ -0.49
SRRM4-201ENST00000267260 CNTD1Q8N815 330 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms