RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 METTL3Q86U44 580 aaKnown RBP16.15■□□□□ 0.18
CTCF-201ENST00000264010 KIAA1191Q96A73 305 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 HOPXQ9BPY8 73 aaPredicted RBP16.15■□□□□ 0.18
CTCF-201ENST00000264010 MGME1Q9BQP7 344 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 ATAD3AQ9NVI7 634 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 EIF3LQ9Y262 564 aaKnown RBP16.15■□□□□ 0.18
CTCF-201ENST00000264010 SHROOM3Q8TF72 1996 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 LCHNA4D1U4 455 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 MROH6A6NGR9 719 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 CCDC154A6NI56 674 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 ZNF195O14628 629 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 SNAP91O60641 907 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 NBNO60934 754 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 TRMUO75648 421 aaKnown RBP16.14■□□□□ 0.18
CTCF-201ENST00000264010 GUCA1CO95843 209 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 ATXN1LP0C7T5 689 aaKnown RBP16.14■□□□□ 0.18
CTCF-201ENST00000264010 FOLH1Q04609 750 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 GALNT1Q10472 559 aaPredicted RBP16.14■□□□□ 0.18
CTCF-201ENST00000264010 SGO1Q5FBB7 561 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 PAOXQ6QHF9 649 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 SPATA19Q7Z5L4 167 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 ISCA2Q86U28 154 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 CDYL2Q8N8U2 506 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 NRG4Q8WWG1 115 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 DERL2Q9GZP9 239 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 WDR70Q9NW82 654 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 SNX5Q9Y5X3 404 aa16.14■□□□□ 0.18
CTCF-201ENST00000264010 MGAMO43451 1857 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 SMIM31A0A1B0GVY4 71 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 FOXD2O60548 495 aaPredicted RBP16.14■□□□□ 0.17
CTCF-201ENST00000264010 STC2O76061 302 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 VCLP18206 1134 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 TRIM60Q495X7 471 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 SCIMPQ6UWF3 145 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 FAM151BQ6UXP7 276 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 GPR150Q8NGU9 434 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 RHEBL1Q8TAI7 183 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 LPGAT1Q92604 370 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 IGSF21Q96ID5 467 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 EBF3Q9H4W6 596 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 MEAF6Q9HAF1 191 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 PHF24Q9UPV7 400 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 FCF1Q9Y324 198 aaKnown RBP16.14■□□□□ 0.17
CTCF-201ENST00000264010 C15orf38-AP3S2A0A0A6YYH1 394 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 KANSL1LA0AUZ9 987 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 STX16-NPEPL1H3BU86 382 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 KATNA1O75449 491 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 SERPINI2O75830 405 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 LAG3P18627 525 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 GABRR2P28476 465 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 UNC50Q53HI1 259 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 TBCELQ5QJ74 424 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 NADSYN1Q6IA69 706 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 ZBTB49Q6ZSB9 765 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 ARPINQ7Z6K5 226 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 MILR1Q7Z6M3 343 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 RBFAQ8N0V3 343 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 LSMEM2Q8N112 164 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 PGBD5Q8N414 524 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 ARL14EPQ8N8R7 260 aaPredicted RBP16.14■□□□□ 0.17
CTCF-201ENST00000264010 OR6K2Q8NGY2 324 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 BTBD9Q96Q07 612 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 ACOX2Q99424 681 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 AKTIPQ9H8T0 292 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 MARCH5Q9NX47 278 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 RABL2AQ9UBK7 228 aaPredicted RBP16.14■□□□□ 0.17
CTCF-201ENST00000264010 SLC25A13Q9UJS0 675 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 TIMM22Q9Y584 194 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 CPQQ9Y646 472 aa16.14■□□□□ 0.17
CTCF-201ENST00000264010 CFAP99D6REC4 459 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 ARHGEF9O43307 516 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 MRPL58Q14197 206 aaKnown RBP16.13■□□□□ 0.17
CTCF-201ENST00000264010 FBXO48Q5FWF7 155 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 SIDT2Q8NBJ9 832 aaKnown RBP16.13■□□□□ 0.17
CTCF-201ENST00000264010 FAM156AQ8NDB6 213 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 ZFYVE1Q9HBF4 777 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 ECI2O75521 394 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 APOA1P02647 267 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 LYPLAL1Q5VWZ2 237 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 PGM2L1Q6PCE3 622 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 IL27RAQ6UWB1 636 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 CPNE9Q8IYJ1 553 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 SNX31Q8N9S9 440 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 ROPN1LQ96C74 230 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 GPR78Q96P69 363 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 SCHIP1Q9P0W5 487 aaPredicted RBP16.13■□□□□ 0.17
CTCF-201ENST00000264010 HCSTQ9UBK5 93 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 EVLQ9UI08 416 aaPredicted RBP16.13■□□□□ 0.17
CTCF-201ENST00000264010 TRAV19A0A0A6YYK7 116 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 NIPSNAP2O75323 286 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 TNFAIP8O95379 198 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 S100A1P23297 94 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 AQP4P55087 323 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 ATXN7L2Q5T6C5 722 aaPredicted RBP16.13■□□□□ 0.17
CTCF-201ENST00000264010 ATG14Q6ZNE5 492 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 TAS1R1Q7RTX1 841 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 MFSD6LQ8IWD5 586 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 PARP8Q8N3A8 854 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 KCTD14Q9BQ13 255 aaPredicted RBP16.13■□□□□ 0.17
CTCF-201ENST00000264010 NUSAP1Q9BXS6 441 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms