RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ANKRD26P1Q6NSI1 321 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 Q6ZNX1 250 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 R3HCC1LQ7Z5L2 792 aaKnown RBP12.28□□□□□ -0.44
CHMP3-201ENST00000263856 CLHC1Q8NHS4 586 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 IRGQQ8WZA9 623 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 NRBF2Q96F24 287 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 SERPINB11Q96P15 392 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 ATOH8Q96SQ7 321 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 LHPPQ9H008 270 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 ZFP14Q9HCL3 533 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 UTS2RQ9UKP6 389 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 GPR45Q9Y5Y3 372 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 SLC12A8A0AV02 714 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 TNPO2O14787 897 aaKnown RBP12.28□□□□□ -0.44
CHMP3-201ENST00000263856 IL12AP29459 219 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 ATP4BP51164 291 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 RAD23AP54725 363 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 MAPK11Q15759 364 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 FRA10AC1Q70Z53 315 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 GLT6D1Q7Z4J2 308 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 PHYKPLQ8IUZ5 450 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 RBM12BQ8IXT5 1001 aaKnown RBP12.28□□□□□ -0.44
CHMP3-201ENST00000263856 TTC9BQ8N6N2 239 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 FAM86B1Q8N7N1 296 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 METTL6Q8TCB7 284 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 SNX19Q92543 992 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 ACBD6Q9BR61 282 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 TRIM54Q9BYV2 358 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 ABCG8Q9H221 673 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 SMOC2Q9H3U7 446 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 CSNK1G1Q9HCP0 422 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 TUBA8Q9NY65 449 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-201ENST00000263856 DAPK2Q9UIK4 370 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 ST14Q9Y5Y6 855 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 RPP40O75818 363 aaKnown RBP12.28□□□□□ -0.44
CHMP3-201ENST00000263856 FUCA1P04066 466 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 CYP4B1P13584 511 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 HRH2P25021 359 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 ARSFP54793 590 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 ZNF33AQ06730 810 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 CD300CQ08708 224 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 GALNT1Q10472 559 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-201ENST00000263856 CYP2A13Q16696 494 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 ZNF829Q3KNS6 432 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-201ENST00000263856 MS4A13Q5J8X5 152 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 FBXL22Q6P050 247 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 UTS2BQ765I0 119 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 ALDH16A1Q8IZ83 802 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 ACDQ96AP0 544 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 DUS3LQ96G46 650 aaKnown RBP12.28□□□□□ -0.44
CHMP3-201ENST00000263856 PPP1R2P1Q96PQ5 205 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 TOR3AQ9H497 397 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 INTS10Q9NVR2 710 aaKnown RBP12.28□□□□□ -0.44
CHMP3-201ENST00000263856 FLRT1Q9NZU1 646 aa12.28□□□□□ -0.44
CHMP3-201ENST00000263856 PTBP2Q9UKA9 531 aaKnown RBP12.28□□□□□ -0.44
CHMP3-201ENST00000263856 THRBP10828 461 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 G6PDP11413 515 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 AGXTP21549 392 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 RXRGP48443 463 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 DGCR6Q14129 220 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 TRIM16LQ309B1 348 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 BROXQ5VW32 411 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 ENPP6Q6UWR7 440 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 SFRP1Q8N474 314 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 DTWD1Q8N5C7 304 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 LPCAT1Q8NF37 534 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 FAM162AQ96A26 154 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 LINGO1Q96FE5 620 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 AARSD1Q9BTE6 412 aaKnown RBP12.27□□□□□ -0.44
CHMP3-201ENST00000263856 APOL5Q9BWW9 433 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 POLR1EQ9GZS1 481 aaKnown RBP12.27□□□□□ -0.44
CHMP3-201ENST00000263856 SLC27A5Q9Y2P5 690 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 PLXNB2O15031 1838 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 SCN4AP35499 1836 aa12.27□□□□□ -0.44
CHMP3-201ENST00000263856 A0A0D9SEW6 157 aa12.27□□□□□ -0.45
CHMP3-201ENST00000263856 GPR182O15218 404 aa12.27□□□□□ -0.45
CHMP3-201ENST00000263856 DEAF1O75398 565 aaPredicted RBP12.27□□□□□ -0.45
CHMP3-201ENST00000263856 CST1P01037 141 aa12.27□□□□□ -0.45
CHMP3-201ENST00000263856 ATXN1LP0C7T5 689 aaKnown RBP12.27□□□□□ -0.45
CHMP3-201ENST00000263856 THPOP40225 353 aa12.27□□□□□ -0.45
CHMP3-201ENST00000263856 MRPS6P82932 125 aaKnown RBP12.27□□□□□ -0.45
CHMP3-201ENST00000263856 PCBP1Q15365 356 aaKnown RBP eCLIP12.27□□□□□ -0.45
CHMP3-201ENST00000263856 GNASQ5JWF2 1037 aa12.27□□□□□ -0.45
CHMP3-201ENST00000263856 SPRED1Q7Z699 444 aa12.27□□□□□ -0.45
CHMP3-201ENST00000263856 BTLAQ7Z6A9 289 aa12.27□□□□□ -0.45
CHMP3-201ENST00000263856 GALNT5Q7Z7M9 940 aa12.27□□□□□ -0.45
CHMP3-201ENST00000263856 ZDHHC13Q8IUH4 622 aa12.27□□□□□ -0.45
CHMP3-201ENST00000263856 C8orf59Q8N0T1 100 aaPredicted RBP12.27□□□□□ -0.45
CHMP3-201ENST00000263856 ATAD1Q8NBU5 361 aa12.27□□□□□ -0.45
CHMP3-201ENST00000263856 OR7D4Q8NG98 312 aa12.27□□□□□ -0.45
CHMP3-201ENST00000263856 OR10A6Q8NH74 314 aa12.27□□□□□ -0.45
CHMP3-201ENST00000263856 EEF1AKMT1Q8WVE0 214 aa12.27□□□□□ -0.45
CHMP3-201ENST00000263856 BRI3BPQ8WY22 251 aa12.27□□□□□ -0.45
CHMP3-201ENST00000263856 MTFMTQ96DP5 389 aaKnown RBP12.27□□□□□ -0.45
CHMP3-201ENST00000263856 CDKN2AIPNLQ96HQ2 116 aa12.27□□□□□ -0.45
CHMP3-201ENST00000263856 TRMT6Q9UJA5 497 aaKnown RBP12.27□□□□□ -0.45
CHMP3-201ENST00000263856 FUOMA2VDF0 154 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 MYADML2A6NDP7 307 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 PEX11BO96011 259 aa12.26□□□□□ -0.45
CHMP3-201ENST00000263856 CAPN1P07384 714 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms