RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 DCTN2Q13561 401 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 TBC1D25Q3MII6 688 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 CEP78Q5JTW2 689 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 TSTD2Q5T7W7 516 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF697Q5TEC3 545 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 METTL21AQ8WXB1 218 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 STON2Q8WXE9 905 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 C8orf33Q9H7E9 229 aaPredicted RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 EDN1P05305 212 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 MC4RP32245 332 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 RAB2AP61019 212 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 CAP1Q01518 475 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 IL17AQ16552 155 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 SHROOM1Q2M3G4 852 aaPredicted RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 TNFAIP8L3Q5GJ75 292 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 GPALPP1Q8IXQ4 340 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF483Q8TF39 744 aaPredicted RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 CAPNS2Q96L46 248 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 SCGB3A2Q96PL1 93 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 EPYCQ99645 322 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ABCA3Q99758 1704 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ALG13Q9NP73 1137 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 EXOSC4Q9NPD3 245 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 TMEM248Q9NWD8 314 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 LYARQ9NX58 379 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 RAI2Q9Y5P3 530 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 DOCK1Q14185 1865 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 HNRNPCP07910 306 aaKnown RBP eCLIP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 CCNYL3P0C7X3 344 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 RPS7P62081 194 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 CLDN10P78369 228 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.28□□□□□ -1.725e-6■■■□□ 14.8
VPS13C-202ENST00000261517 ZNF792Q3KQV3 632 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 PDSS1Q5T2R2 415 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 CCDC36Q8IYA8 594 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 C1orf127Q8N9H9 656 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 LINGO1Q96FE5 620 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF668Q96K58 619 aaPredicted RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 NSMCE3Q96MG7 304 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 OR52E6Q96RD3 313 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 C19orf43Q9BQ61 176 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 CORO1BQ9BR76 489 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 GSDMCQ9BYG8 508 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ARHGEF4Q9NR80 690 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ZDHHC3Q9NYG2 299 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 UBE2QL1A1L167 161 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 SH3PXD2BA1X283 911 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 SLC38A8A6NNN8 435 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 TOR1BO14657 336 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ATP9AO75110 1047 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 CCNE2O96020 404 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 COX10Q12887 443 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 SLC44A4Q53GD3 710 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 IZUMO2Q6UXV1 221 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 DEFB128Q7Z7B8 93 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 DCP2Q8IU60 420 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 EPHX4Q8IUS5 362 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 FIG4Q92562 907 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 TLCD1Q96CP7 247 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ZFP14Q9HCL3 533 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 DUS2Q9NX74 493 aaKnown RBP4.28□□□□□ -1.72
VPS13C-202ENST00000261517 DLGAP2Q9P1A6 1054 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 SUSD2Q9UGT4 822 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 POLR1DQ9Y2S0 133 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 UGT2B17O75795 530 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 TM7SF2O76062 418 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ABATP80404 500 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 ZCCHC12Q6PEW1 402 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 KDELC2Q7Z4H8 507 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 CAMKVQ8NCB2 501 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 PJA1Q8NG27 643 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 OR56A1Q8NGH5 318 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 PNPLA2Q96AD5 504 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 CAAP1Q9H8G2 361 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 KLQ9UEF7 1012 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 SSR3Q9UNL2 185 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 SNX8Q9Y5X2 465 aa4.28□□□□□ -1.72
VPS13C-202ENST00000261517 DLEC1Q9Y238 1755 aa4.28□□□□□ -1.73
VPS13C-202ENST00000261517 FADS2P1A8MWK0 482 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GATBO75879 557 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 EDNRBP24530 442 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CDK9P50750 372 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 EIF5AP63241 154 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 IL5RAQ01344 420 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TAF13Q15543 124 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 HSF5Q4G112 596 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 RAP1GAP2Q684P5 730 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF776Q68DI1 518 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CCDC103Q8IW40 242 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 RBM12BQ8IXT5 1001 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 FATE1Q969F0 183 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 MARK4Q96L34 752 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 KREMEN1Q96MU8 473 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TCF25Q9BQ70 676 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TRIM2Q9C040 744 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ALG9Q9H6U8 611 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CIDEBQ9UHD4 219 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 STOML2Q9UJZ1 356 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 STON1Q9Y6Q2 735 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 DUSP10Q9Y6W6 482 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms