RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 TTC1Q99614 292 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 SPATA16Q9BXB7 569 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 DRC3Q9H069 523 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 DENND2DQ9H6A0 471 aaPredicted RBP18.7■□□□□ 0.58
TRIM47-201ENST00000254816 TMPRSS11EQ9UL52 423 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 PPM1HQ9ULR3 514 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 C15orf41Q9Y2V0 281 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 PCDHB1Q9Y5F3 818 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 PRUNE2Q8WUY3 3088 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 AGAP14A8MT82 685 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 H3BQ06 376 aaPredicted RBP18.7■□□□□ 0.58
TRIM47-201ENST00000254816 CDC7O00311 574 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 CCDC22O60826 627 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 PTPN5P54829 565 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 RCN2Q14257 317 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 ARL13AQ5H913 290 aaPredicted RBP18.7■□□□□ 0.58
TRIM47-201ENST00000254816 DPPA4Q7L190 304 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 MAVSQ7Z434 540 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 MMAAQ8IVH4 418 aaKnown RBP18.7■□□□□ 0.58
TRIM47-201ENST00000254816 LSMEM2Q8N112 164 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 KDM1BQ8NB78 822 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 SMRP1Q8NCR6 262 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 BTBD10Q9BSF8 475 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 WRAP53Q9BUR4 548 aaKnown RBP18.7■□□□□ 0.58
TRIM47-201ENST00000254816 NCKIPSDQ9NZQ3 722 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 THAP10Q9P2Z0 257 aaPredicted RBP18.7■□□□□ 0.58
TRIM47-201ENST00000254816 COMMD10Q9Y6G5 202 aa18.7■□□□□ 0.58
TRIM47-201ENST00000254816 NPEPPSL1A6NEC2 478 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 UBXN8O00124 270 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 ENTPD5O75356 428 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 IPO13O94829 963 aaKnown RBP18.69■□□□□ 0.58
TRIM47-201ENST00000254816 TRIM16O95361 564 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 TSPAN12O95859 305 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 MMP12P39900 470 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 GRIA2P42262 883 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 ELAVL3Q14576 367 aaKnown RBP18.69■□□□□ 0.58
TRIM47-201ENST00000254816 TSNQ15631 228 aaKnown RBP18.69■□□□□ 0.58
TRIM47-201ENST00000254816 WDR75Q8IWA0 830 aaKnown RBP18.69■□□□□ 0.58
TRIM47-201ENST00000254816 LINGO1Q96FE5 620 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 DERL2Q9GZP9 239 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 GNPTGQ9UJJ9 305 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 H0Y3Z8 333 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 GYG2O15488 501 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 SPINT1O43278 529 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 APODP05090 189 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 ESRRAP11474 423 aaPredicted RBP18.69■□□□□ 0.58
TRIM47-201ENST00000254816 RPS3P23396 243 aaKnown RBP eCLIP18.69■□□□□ 0.581e-9■■■□□ 16.3
TRIM47-201ENST00000254816 GALK1P51570 392 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 PRKAA2P54646 552 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 B4GALNT1Q00973 533 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 VWA5B1Q5TIE3 1220 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 LYPLAL1Q5VWZ2 237 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 CACUL1Q86Y37 369 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 TREML1Q86YW5 311 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 TMIEQ8NEW7 156 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 ATOH8Q96SQ7 321 aa18.69■□□□□ 0.58
TRIM47-201ENST00000254816 TFB2MQ9H5Q4 396 aaKnown RBP18.69■□□□□ 0.58
TRIM47-201ENST00000254816 MBD1Q9UIS9 605 aaPredicted RBP18.69■□□□□ 0.58
TRIM47-201ENST00000254816 BTN3A1O00481 513 aa18.68■□□□□ 0.58
TRIM47-201ENST00000254816 HNRNPCL1O60812 293 aaKnown RBP18.68■□□□□ 0.58
TRIM47-201ENST00000254816 SLC25A14O95258 325 aaPredicted RBP18.68■□□□□ 0.58
TRIM47-201ENST00000254816 HNRNPLP14866 589 aaKnown RBP eCLIP18.68■□□□□ 0.58
TRIM47-201ENST00000254816 CD9P21926 228 aa18.68■□□□□ 0.58
TRIM47-201ENST00000254816 EIF2DP41214 584 aaKnown RBP18.68■□□□□ 0.58
TRIM47-201ENST00000254816 SEC13P55735 322 aa18.68■□□□□ 0.58
TRIM47-201ENST00000254816 DNAJB13P59910 316 aa18.68■□□□□ 0.58
TRIM47-201ENST00000254816 HTR4Q13639 388 aa18.68■□□□□ 0.58
TRIM47-201ENST00000254816 AAK1Q2M2I8 961 aa18.68■□□□□ 0.58
TRIM47-201ENST00000254816 LIPIQ6XZB0 460 aa18.68■□□□□ 0.58
TRIM47-201ENST00000254816 NKAPQ8N5F7 415 aaKnown RBP18.68■□□□□ 0.58
TRIM47-201ENST00000254816 HCAR2Q8TDS4 363 aa18.68■□□□□ 0.58
TRIM47-201ENST00000254816 FAM83DQ9H4H8 585 aa18.68■□□□□ 0.58
TRIM47-201ENST00000254816 RNPEPL1Q9HAU8 725 aa18.68■□□□□ 0.58
TRIM47-201ENST00000254816 PRSS16Q9NQE7 514 aa18.68■□□□□ 0.58
TRIM47-201ENST00000254816 ZDHHC3Q9NYG2 299 aa18.68■□□□□ 0.58
TRIM47-201ENST00000254816 COQ6Q9Y2Z9 468 aa18.68■□□□□ 0.58
TRIM47-201ENST00000254816 DHRS7Q9Y394 339 aa18.68■□□□□ 0.58
TRIM47-201ENST00000254816 MTX2O75431 263 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 ENO1P06733 434 aaKnown RBP18.67■□□□□ 0.58
TRIM47-201ENST00000254816 ELFN1P0C7U0 828 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 CALB2P22676 271 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 ALDH18A1P54886 795 aaKnown RBP18.67■□□□□ 0.58
TRIM47-201ENST00000254816 IL2P60568 153 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 KRT72Q14CN4 511 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 CFAP157Q5JU67 520 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 ERAP2Q6P179 960 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 FBXL19Q6PCT2 694 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 MTSS1LQ765P7 747 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 DET1Q7L5Y6 550 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 KIAA1191Q96A73 305 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 COPS8Q99627 209 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 RIOK2Q9BVS4 552 aaKnown RBP18.67■□□□□ 0.58
TRIM47-201ENST00000254816 CDH19Q9H159 772 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 ZDHHC2Q9UIJ5 367 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 RNF112Q9ULX5 631 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 F8W8V4 182 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 ZNF195O14628 629 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 GSC2O15499 205 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 MTHFD2P13995 350 aa18.67■□□□□ 0.58
TRIM47-201ENST00000254816 NFKBIAP25963 317 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms