RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 DISC1C4P0D8 188 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 ADM5C9JUS6 153 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 IPO13O94829 963 aaKnown RBP13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 CATP04040 527 aaKnown RBP13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 RHOCP08134 193 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 IRF1P10914 325 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 FGFR1P11362 822 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 IL7P13232 177 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF182P17025 639 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 LCN1P31025 176 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 TMBIM6P55061 237 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 FKBP1AP62942 108 aaKnown RBP13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 OGFRL1Q5TC84 451 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 ESRP1Q6NXG1 681 aaKnown RBP13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 USP45Q70EL2 814 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 VANGL1Q8TAA9 524 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 UFD1Q92890 307 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 RFKQ969G6 155 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 CPB2Q96IY4 423 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 TSNAXQ99598 290 aaKnown RBP13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 SPATC1LQ9H0A9 340 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 AGO4Q9HCK5 861 aaKnown RBP13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 RPH3AQ9Y2J0 694 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 MEMO1Q9Y316 297 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 APOC3P02656 99 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 CD2P06729 351 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 ODC1P11926 461 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 FOSL1P15407 271 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 ARFIP1P53367 373 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 CRY2Q49AN0 593 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 TCEAL5Q5H9L2 206 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 NPNTQ6UXI9 565 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 CHST15Q7LFX5 561 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 C4orf19Q8IY42 314 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 OR5K1Q8NHB7 308 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 SLC9A6Q92581 669 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF350Q9GZX5 532 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 GLS2Q9UI32 602 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 RAB23Q9ULC3 237 aa13.06□□□□□ -0.32
PCDHGA3-201ENST00000253812 UGT2B17O75795 530 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 PDHA2P29803 388 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 PRKAG1P54619 331 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 SOX10P56693 466 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 CDKL1Q00532 357 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 RAP1GAP2Q684P5 730 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF767PQ75MW2 155 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 TRIM48Q8IWZ4 208 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 SHC3Q92529 594 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 KCTD15Q96SI1 283 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 LPIN3Q9BQK8 851 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 SNTG2Q9NY99 539 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 TRIM64A6NGJ6 449 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 TRIM64BA6NI03 449 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 SH3BGRLO75368 114 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 HIST1H2ABP04908 130 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 LIMK2P53671 638 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 PGM5Q15124 567 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 HIST3H2AQ7L7L0 130 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 TMEM126BQ8IUX1 230 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 HEXDCQ8WVB3 486 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 HIST1H2ACQ93077 130 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 KCTD7Q96MP8 289 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 C1orf21Q9H246 121 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 MROH8Q9H579 483 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 GBA2Q9HCG7 927 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 FAM53CQ9NYF3 392 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 CKLFQ9UBR5 152 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 MRC1P22897 1456 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 FAM47E-STBD1D6RA91 191 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 MICAL2O94851 1124 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF143P52747 638 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 RELAQ04206 551 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 PEX6Q13608 980 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 FKBP1CQ5VVH2 108 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF773Q6PK81 442 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 ADGRF2Q8IZF7 708 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF670Q9BS34 389 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 ITPAQ9BY32 194 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 GLIS2Q9BZE0 524 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 FETUBQ9UGM5 382 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF639Q9UID6 485 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 OAZ3Q9UMX2 235 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 VWA7Q9Y334 891 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 PIK3C2AO00443 1686 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 INMTO95050 263 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 CREB1P16220 341 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 TNNI3P19429 210 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 RPL35P42766 123 aaKnown RBP13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 ARSHQ5FYA8 562 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 TOMM5Q8N4H5 51 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 STON2Q8WXE9 905 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 AP1S3Q96PC3 154 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 TNKS2Q9H2K2 1166 aa13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 ELL3Q9HB65 397 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 ABI2Q9NYB9 513 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA3-201ENST00000253812 RNF225M0QZC1 329 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 CYB561D2O14569 222 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 PCSK2P16519 638 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 PBLDP30039 288 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 HTR2BP41595 481 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms