RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 ATP6AP2A0A1C7CYW4 349 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 PRR5-ARHGAP8B1AHC4 643 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 FPGTO14772 594 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 KLF11O14901 512 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 ATP6AP2O75787 350 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 CLPTM1O96005 669 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 POU1F1P28069 291 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 CMPK1P30085 196 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 MTHFRP42898 656 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 ARHGAP8P85298 464 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 TMED1Q13445 227 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 ATP13A5Q4VNC0 1218 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 CPTPQ5TA50 214 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 ULK2Q8IYT8 1036 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 ZFRQ96KR1 1074 aaKnown RBP14.86□□□□□ -0.03
UBE4B-201ENST00000253251 ZNF641Q96N77 438 aaPredicted RBP14.86□□□□□ -0.03
UBE4B-201ENST00000253251 AARSD1Q9BTE6 412 aaKnown RBP14.86□□□□□ -0.03
UBE4B-201ENST00000253251 TBCDQ9BTW9 1192 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 WRAP53Q9BUR4 548 aaKnown RBP14.86□□□□□ -0.03
UBE4B-201ENST00000253251 SLC2A11Q9BYW1 496 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 MIR1-1HGQ9H1L0 117 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 NOL11Q9H8H0 719 aaKnown RBP14.86□□□□□ -0.03
UBE4B-201ENST00000253251 POLR3HQ9Y535 204 aaPredicted RBP14.86□□□□□ -0.03
UBE4B-201ENST00000253251 CAPZA2P47755 286 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 HNMTP50135 292 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 BLKP51451 505 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 TOP3AQ13472 1001 aaPredicted RBP14.86□□□□□ -0.03
UBE4B-201ENST00000253251 C22orf39Q6P5X5 142 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 GLB1L3Q8NCI6 653 aaPredicted RBP14.86□□□□□ -0.03
UBE4B-201ENST00000253251 RMND5BQ96G75 393 aaPredicted RBP14.86□□□□□ -0.03
UBE4B-201ENST00000253251 MARK4Q96L34 752 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 GPR22Q99680 433 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 C3orf14Q9HBI5 128 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 POPDC3Q9HBV1 291 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 ITM2CQ9NQX7 267 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 C15orf41Q9Y2V0 281 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 TCRBV7S3A2A0A539 114 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 UPK3BL1B0FP48 263 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 UPK3BL2E5RIL1 263 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 DCLK1O15075 740 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 COCHO43405 550 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 SERPINB7O75635 380 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 BNIP1Q12981 228 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 RFX4Q33E94 735 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 MARCH8Q5T0T0 291 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 IRGCQ6NXR0 463 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 CYS1Q717R9 158 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 RTL10Q7L3V2 364 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 CFAP206Q8IYR0 622 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 NUS1Q96E22 293 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 C1orf50Q9BV19 199 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 CACNA2D2Q9NY47 1150 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 ARL5AQ9Y689 179 aa14.86□□□□□ -0.03
UBE4B-201ENST00000253251 GSAPA4D1B5 854 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 EIF4E1BA6NMX2 242 aaKnown RBP14.85□□□□□ -0.03
UBE4B-201ENST00000253251 SOCS7O14512 581 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 EDIL3O43854 480 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 CSF2RAP15509 400 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 NDUFS1P28331 727 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 GUCA1AP43080 201 aaPredicted RBP14.85□□□□□ -0.03
UBE4B-201ENST00000253251 KIR3DL1P43629 444 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 NCF4Q15080 339 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 SCIMPQ6UWF3 145 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 FAM124AQ86V42 546 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 DNAJB14Q8TBM8 379 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 SIGLEC10Q96LC7 697 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 NMUR2Q9GZQ4 415 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 ZNF780BQ9Y6R6 833 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 VGLL3A8MV65 326 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 SH3BGRLO75368 114 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 ATP6V1B1P15313 513 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 ITPKAP23677 461 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 SSR2P43308 183 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 GATMP50440 423 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 IL5RAQ01344 420 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 TEAD2Q15562 447 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 FAM171BQ6P995 826 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.85□□□□□ -0.03
UBE4B-201ENST00000253251 GPR156Q8NFN8 814 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 PCCBP05166 539 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 IMPDH1P20839 514 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 GRIA3P42263 894 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 WASP42768 502 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 SLC18A2Q05940 514 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 TSNQ15631 228 aaKnown RBP14.85□□□□□ -0.03
UBE4B-201ENST00000253251 PM20D1Q6GTS8 502 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 TMPRSS11BQ86T26 416 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 FBXW8Q8N3Y1 598 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 PSKH2Q96QS6 385 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 MIPEPQ99797 713 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 DUSP12Q9UNI6 340 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 ZNF840PA6NDX5 716 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 SIN3BO75182 1162 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 TIMP1P01033 207 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 POLR2JP52435 117 aaKnown RBP14.85□□□□□ -0.03
UBE4B-201ENST00000253251 QPCTQ16769 361 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 NDUFA9Q16795 377 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 OTUD3Q5T2D3 398 aaPredicted RBP14.85□□□□□ -0.03
UBE4B-201ENST00000253251 GCNT7Q6ZNI0 430 aa14.85□□□□□ -0.03
UBE4B-201ENST00000253251 ZC3HC1Q86WB0 502 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms